Experiment: copper (II) chloride 3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS22980 and BWI76_RS22985 are separated by 211 nucleotides BWI76_RS22985 and BWI76_RS22990 are separated by 47 nucleotides BWI76_RS22990 and BWI76_RS22995 are separated by 44 nucleotides BWI76_RS22995 and BWI76_RS23000 are separated by 100 nucleotides BWI76_RS23000 and BWI76_RS23005 are separated by 74 nucleotides BWI76_RS23005 and BWI76_RS23010 overlap by 7 nucleotides
BWI76_RS22980: BWI76_RS22980 - murein transglycosylase A, at 4,797,115 to 4,798,212
_RS22980
BWI76_RS22985: BWI76_RS22985 - tRNA-Met, at 4,798,424 to 4,798,500
_RS22985
BWI76_RS22990: BWI76_RS22990 - tRNA-Met, at 4,798,548 to 4,798,624
_RS22990
BWI76_RS22995: BWI76_RS22995 - tRNA-Met, at 4,798,669 to 4,798,745
_RS22995
BWI76_RS23000: BWI76_RS23000 - nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase, at 4,798,846 to 4,799,901
_RS23000
BWI76_RS23005: BWI76_RS23005 - bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase, at 4,799,976 to 4,800,521
_RS23005
BWI76_RS23010: BWI76_RS23010 - cobyric acid synthase CobQ, at 4,800,515 to 4,802,038
_RS23010
Position (kb)
4798
4799
4800 Strain fitness (log2 ratio)
-1
0
1 at 4797.987 kb on - strand, within BWI76_RS22980 at 4797.989 kb on + strand, within BWI76_RS22980 at 4798.027 kb on - strand, within BWI76_RS22980 at 4798.112 kb on + strand at 4798.245 kb on - strand at 4799.001 kb on + strand, within BWI76_RS23000 at 4799.051 kb on - strand, within BWI76_RS23000 at 4799.933 kb on - strand at 4800.011 kb on + strand at 4800.013 kb on - strand at 4800.126 kb on - strand, within BWI76_RS23005 at 4800.368 kb on - strand, within BWI76_RS23005 at 4800.650 kb on + strand at 4800.697 kb on + strand, within BWI76_RS23010 at 4800.891 kb on + strand, within BWI76_RS23010
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 3 mM remove 4,797,987 - BWI76_RS22980 0.79 -0.6 4,797,989 + BWI76_RS22980 0.80 +0.1 4,798,027 - BWI76_RS22980 0.83 -0.8 4,798,112 + -0.0 4,798,245 - +0.2 4,799,001 + BWI76_RS23000 0.15 -0.3 4,799,051 - BWI76_RS23000 0.19 +1.1 4,799,933 - -0.8 4,800,011 + -0.5 4,800,013 - +0.1 4,800,126 - BWI76_RS23005 0.27 +0.8 4,800,368 - BWI76_RS23005 0.72 +0.3 4,800,650 + -0.7 4,800,697 + BWI76_RS23010 0.12 +1.0 4,800,891 + BWI76_RS23010 0.25 -1.0
Or see this region's nucleotide sequence