Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS19880

Experiment: copper (II) chloride 3 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS19875 and BWI76_RS19880 overlap by 38 nucleotidesBWI76_RS19880 and BWI76_RS19885 are separated by 168 nucleotides BWI76_RS19875: BWI76_RS19875 - sulfate transporter, at 4,155,578 to 4,156,825 _RS19875 BWI76_RS19880: BWI76_RS19880 - magnesium transporter, at 4,156,788 to 4,158,224 _RS19880 BWI76_RS19885: BWI76_RS19885 - multidrug ABC transporter permease/ATP-binding protein, at 4,158,393 to 4,160,036 _RS19885 Position (kb) 4156 4157 4158 4159Strain fitness (log2 ratio) -1 0 1at 4156.769 kb on - strandat 4156.862 kb on + strandat 4156.943 kb on + strand, within BWI76_RS19880at 4157.216 kb on + strand, within BWI76_RS19880at 4157.562 kb on - strand, within BWI76_RS19880at 4157.627 kb on - strand, within BWI76_RS19880at 4157.835 kb on + strand, within BWI76_RS19880at 4158.989 kb on - strand, within BWI76_RS19885at 4159.072 kb on - strand, within BWI76_RS19885at 4159.167 kb on + strand, within BWI76_RS19885at 4159.190 kb on - strand, within BWI76_RS19885

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Per-strain Table

Position Strand Gene LocusTag Fraction copper (II) chloride 3 mM
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4,156,769 - +0.3
4,156,862 + -0.2
4,156,943 + BWI76_RS19880 0.11 +0.2
4,157,216 + BWI76_RS19880 0.30 +0.6
4,157,562 - BWI76_RS19880 0.54 +0.1
4,157,627 - BWI76_RS19880 0.58 +0.5
4,157,835 + BWI76_RS19880 0.73 +0.5
4,158,989 - BWI76_RS19885 0.36 +1.5
4,159,072 - BWI76_RS19885 0.41 +0.0
4,159,167 + BWI76_RS19885 0.47 +0.0
4,159,190 - BWI76_RS19885 0.48 +0.4

Or see this region's nucleotide sequence