Experiment: copper (II) chloride 3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS16995 and BWI76_RS17000 are separated by 2 nucleotides BWI76_RS17000 and BWI76_RS17005 are separated by 442 nucleotides BWI76_RS17005 and BWI76_RS17010 are separated by 11 nucleotides BWI76_RS17010 and BWI76_RS17015 are separated by 2 nucleotides
BWI76_RS16995: BWI76_RS16995 - Fe-S cluster assembly protein SufB, at 3,524,329 to 3,525,816
_RS16995
BWI76_RS17000: BWI76_RS17000 - Fe-S cluster assembly scaffold SufA, at 3,525,819 to 3,526,196
_RS17000
BWI76_RS17005: BWI76_RS17005 - hypothetical protein, at 3,526,639 to 3,527,151
_RS17005
BWI76_RS17010: BWI76_RS17010 - fimbrial protein, at 3,527,163 to 3,528,110
_RS17010
BWI76_RS17015: BWI76_RS17015 - fimbrial assembly protein, at 3,528,113 to 3,530,656
_RS17015
Position (kb)
3526
3527
3528 Strain fitness (log2 ratio)
-1
0
1 at 3525.897 kb on + strand, within BWI76_RS17000 at 3525.998 kb on - strand, within BWI76_RS17000 at 3526.143 kb on - strand, within BWI76_RS17000 at 3526.205 kb on + strand at 3526.459 kb on + strand at 3526.630 kb on - strand at 3526.671 kb on + strand at 3526.854 kb on + strand, within BWI76_RS17005 at 3526.958 kb on + strand, within BWI76_RS17005 at 3526.965 kb on + strand, within BWI76_RS17005 at 3527.044 kb on + strand, within BWI76_RS17005 at 3527.050 kb on + strand, within BWI76_RS17005 at 3527.188 kb on + strand at 3527.203 kb on + strand at 3527.255 kb on + strand at 3527.344 kb on + strand, within BWI76_RS17010 at 3527.372 kb on - strand, within BWI76_RS17010 at 3527.391 kb on + strand, within BWI76_RS17010 at 3527.606 kb on + strand, within BWI76_RS17010 at 3527.614 kb on - strand, within BWI76_RS17010 at 3527.702 kb on - strand, within BWI76_RS17010 at 3527.712 kb on - strand, within BWI76_RS17010 at 3527.748 kb on - strand, within BWI76_RS17010 at 3527.870 kb on + strand, within BWI76_RS17010 at 3527.905 kb on - strand, within BWI76_RS17010 at 3527.987 kb on + strand, within BWI76_RS17010 at 3527.990 kb on + strand, within BWI76_RS17010 at 3527.995 kb on - strand, within BWI76_RS17010 at 3528.001 kb on + strand, within BWI76_RS17010 at 3528.001 kb on + strand, within BWI76_RS17010 at 3528.050 kb on - strand at 3528.055 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 3 mM remove 3,525,897 + BWI76_RS17000 0.21 -0.3 3,525,998 - BWI76_RS17000 0.47 -1.2 3,526,143 - BWI76_RS17000 0.86 +0.0 3,526,205 + +0.6 3,526,459 + +0.1 3,526,630 - +0.2 3,526,671 + +0.1 3,526,854 + BWI76_RS17005 0.42 +0.4 3,526,958 + BWI76_RS17005 0.62 +0.1 3,526,965 + BWI76_RS17005 0.64 +0.3 3,527,044 + BWI76_RS17005 0.79 +0.6 3,527,050 + BWI76_RS17005 0.80 +0.8 3,527,188 + +0.1 3,527,203 + +0.1 3,527,255 + +0.1 3,527,344 + BWI76_RS17010 0.19 +0.3 3,527,372 - BWI76_RS17010 0.22 -0.3 3,527,391 + BWI76_RS17010 0.24 -0.1 3,527,606 + BWI76_RS17010 0.47 -0.5 3,527,614 - BWI76_RS17010 0.48 +0.4 3,527,702 - BWI76_RS17010 0.57 +0.5 3,527,712 - BWI76_RS17010 0.58 +0.5 3,527,748 - BWI76_RS17010 0.62 -0.8 3,527,870 + BWI76_RS17010 0.75 +0.1 3,527,905 - BWI76_RS17010 0.78 +0.5 3,527,987 + BWI76_RS17010 0.87 -0.3 3,527,990 + BWI76_RS17010 0.87 +0.2 3,527,995 - BWI76_RS17010 0.88 +0.2 3,528,001 + BWI76_RS17010 0.88 +0.6 3,528,001 + BWI76_RS17010 0.88 +0.1 3,528,050 - -0.1 3,528,055 + -0.1
Or see this region's nucleotide sequence