Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS16255

Experiment: copper (II) chloride 3 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS16250 and BWI76_RS16255 are separated by 251 nucleotidesBWI76_RS16255 and BWI76_RS16260 are separated by 477 nucleotides BWI76_RS16250: BWI76_RS16250 - DNA-binding response regulator, at 3,369,621 to 3,370,337 _RS16250 BWI76_RS16255: BWI76_RS16255 - histidine kinase, at 3,370,589 to 3,372,364 _RS16255 BWI76_RS16260: BWI76_RS16260 - two-component sensor histidine kinase, at 3,372,842 to 3,374,143 _RS16260 Position (kb) 3370 3371 3372 3373Strain fitness (log2 ratio) -1 0 1at 3369.736 kb on + strand, within BWI76_RS16250at 3369.994 kb on + strand, within BWI76_RS16250at 3369.994 kb on - strand, within BWI76_RS16250at 3370.203 kb on + strand, within BWI76_RS16250at 3370.203 kb on + strand, within BWI76_RS16250at 3370.369 kb on - strandat 3370.524 kb on + strandat 3370.524 kb on + strandat 3370.524 kb on + strandat 3370.524 kb on + strandat 3370.532 kb on - strandat 3370.532 kb on - strandat 3370.725 kb on + strandat 3370.961 kb on - strand, within BWI76_RS16255at 3371.138 kb on - strand, within BWI76_RS16255at 3371.154 kb on + strand, within BWI76_RS16255at 3371.375 kb on - strand, within BWI76_RS16255at 3371.400 kb on + strand, within BWI76_RS16255at 3371.439 kb on + strand, within BWI76_RS16255at 3371.439 kb on + strand, within BWI76_RS16255at 3371.439 kb on + strand, within BWI76_RS16255at 3371.439 kb on + strand, within BWI76_RS16255at 3371.447 kb on - strand, within BWI76_RS16255at 3371.630 kb on - strand, within BWI76_RS16255at 3371.809 kb on + strand, within BWI76_RS16255at 3371.955 kb on + strand, within BWI76_RS16255at 3372.119 kb on + strand, within BWI76_RS16255at 3372.198 kb on + strandat 3373.360 kb on - strand, within BWI76_RS16260

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Per-strain Table

Position Strand Gene LocusTag Fraction copper (II) chloride 3 mM
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3,369,736 + BWI76_RS16250 0.16 -1.0
3,369,994 + BWI76_RS16250 0.52 -0.1
3,369,994 - BWI76_RS16250 0.52 -0.4
3,370,203 + BWI76_RS16250 0.81 +0.1
3,370,203 + BWI76_RS16250 0.81 +0.1
3,370,369 - -0.1
3,370,524 + -0.0
3,370,524 + -0.1
3,370,524 + +0.1
3,370,524 + -0.2
3,370,532 - -0.6
3,370,532 - +0.0
3,370,725 + +0.1
3,370,961 - BWI76_RS16255 0.21 -1.3
3,371,138 - BWI76_RS16255 0.31 +1.7
3,371,154 + BWI76_RS16255 0.32 -0.1
3,371,375 - BWI76_RS16255 0.44 +0.4
3,371,400 + BWI76_RS16255 0.46 +0.1
3,371,439 + BWI76_RS16255 0.48 +0.4
3,371,439 + BWI76_RS16255 0.48 +0.6
3,371,439 + BWI76_RS16255 0.48 +0.1
3,371,439 + BWI76_RS16255 0.48 +0.6
3,371,447 - BWI76_RS16255 0.48 -0.6
3,371,630 - BWI76_RS16255 0.59 +1.4
3,371,809 + BWI76_RS16255 0.69 +0.0
3,371,955 + BWI76_RS16255 0.77 +1.5
3,372,119 + BWI76_RS16255 0.86 +0.1
3,372,198 + +0.6
3,373,360 - BWI76_RS16260 0.40 -0.8

Or see this region's nucleotide sequence