Experiment: copper (II) chloride 3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS16100 and BWI76_RS16105 are separated by 23 nucleotides BWI76_RS16105 and BWI76_RS16110 are separated by 409 nucleotides BWI76_RS16110 and BWI76_RS16115 are separated by 52 nucleotides
BWI76_RS16100: BWI76_RS16100 - flavocytochrome c, at 3,338,556 to 3,341,333
_RS16100
BWI76_RS16105: BWI76_RS16105 - hypothetical protein, at 3,341,357 to 3,341,551
_RS16105
BWI76_RS16110: BWI76_RS16110 - L-tartrate/succinate antiporter, at 3,341,961 to 3,343,466
_RS16110
BWI76_RS16115: BWI76_RS16115 - fumarate hydratase, at 3,343,519 to 3,345,174
_RS16115
Position (kb)
3341
3342
3343
3344 Strain fitness (log2 ratio)
-2
-1
0
1 at 3341.058 kb on - strand at 3341.121 kb on - strand at 3341.197 kb on + strand at 3341.199 kb on - strand at 3341.199 kb on - strand at 3341.205 kb on - strand at 3341.215 kb on - strand at 3341.222 kb on - strand at 3341.222 kb on - strand at 3341.222 kb on - strand at 3341.222 kb on - strand at 3341.258 kb on - strand at 3341.284 kb on + strand at 3341.287 kb on - strand at 3341.305 kb on - strand at 3341.305 kb on - strand at 3341.314 kb on - strand at 3341.977 kb on + strand at 3341.979 kb on + strand at 3341.979 kb on + strand at 3341.980 kb on + strand at 3341.980 kb on + strand at 3341.981 kb on + strand at 3341.987 kb on - strand at 3341.987 kb on - strand at 3341.988 kb on - strand at 3342.012 kb on + strand at 3342.051 kb on - strand at 3342.216 kb on + strand, within BWI76_RS16110 at 3342.224 kb on + strand, within BWI76_RS16110 at 3342.229 kb on + strand, within BWI76_RS16110 at 3342.473 kb on + strand, within BWI76_RS16110 at 3342.538 kb on + strand, within BWI76_RS16110 at 3342.582 kb on - strand, within BWI76_RS16110 at 3342.592 kb on - strand, within BWI76_RS16110 at 3342.643 kb on + strand, within BWI76_RS16110 at 3343.663 kb on - strand at 3343.663 kb on - strand at 3343.929 kb on + strand, within BWI76_RS16115 at 3344.316 kb on - strand, within BWI76_RS16115 at 3344.316 kb on - strand, within BWI76_RS16115
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 3 mM remove 3,341,058 - -0.9 3,341,121 - -0.2 3,341,197 + +1.5 3,341,199 - +0.6 3,341,199 - +0.2 3,341,205 - +1.6 3,341,215 - -0.4 3,341,222 - -1.3 3,341,222 - +0.9 3,341,222 - -0.7 3,341,222 - -0.5 3,341,258 - -0.9 3,341,284 + -1.9 3,341,287 - +0.2 3,341,305 - +1.4 3,341,305 - +0.5 3,341,314 - -1.8 3,341,977 + +0.9 3,341,979 + -1.7 3,341,979 + -1.4 3,341,980 + +1.1 3,341,980 + -0.0 3,341,981 + -1.3 3,341,987 - -0.6 3,341,987 - +0.9 3,341,988 - +0.9 3,342,012 + +0.1 3,342,051 - +0.9 3,342,216 + BWI76_RS16110 0.17 +0.6 3,342,224 + BWI76_RS16110 0.17 +1.0 3,342,229 + BWI76_RS16110 0.18 +0.2 3,342,473 + BWI76_RS16110 0.34 +0.9 3,342,538 + BWI76_RS16110 0.38 -0.1 3,342,582 - BWI76_RS16110 0.41 -0.0 3,342,592 - BWI76_RS16110 0.42 +0.4 3,342,643 + BWI76_RS16110 0.45 +0.4 3,343,663 - -1.7 3,343,663 - -1.4 3,343,929 + BWI76_RS16115 0.25 +0.3 3,344,316 - BWI76_RS16115 0.48 +0.6 3,344,316 - BWI76_RS16115 0.48 +1.0
Or see this region's nucleotide sequence