Experiment: copper (II) chloride 3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS13570 and BWI76_RS13575 are separated by 304 nucleotides BWI76_RS13575 and BWI76_RS13580 are separated by 100 nucleotides BWI76_RS13580 and BWI76_RS13585 are separated by 68 nucleotides
BWI76_RS13570: BWI76_RS13570 - mandelate racemase/muconate lactonizing protein, at 2,829,188 to 2,830,384
_RS13570
BWI76_RS13575: BWI76_RS13575 - sugar binding transcriptional regulator, LacI family protein, at 2,830,689 to 2,831,693
_RS13575
BWI76_RS13580: BWI76_RS13580 - glutathione S-transferase domain protein, at 2,831,794 to 2,832,411
_RS13580
BWI76_RS13585: BWI76_RS13585 - 4-oxalocrotonate tautomerase, at 2,832,480 to 2,832,707
_RS13585
Position (kb)
2830
2831
2832 Strain fitness (log2 ratio)
-1
0
1
2
3 at 2829.695 kb on + strand, within BWI76_RS13570 at 2829.800 kb on - strand, within BWI76_RS13570 at 2829.906 kb on - strand, within BWI76_RS13570 at 2829.995 kb on - strand, within BWI76_RS13570 at 2829.997 kb on + strand, within BWI76_RS13570 at 2830.087 kb on + strand, within BWI76_RS13570 at 2830.957 kb on + strand, within BWI76_RS13575 at 2831.040 kb on + strand, within BWI76_RS13575 at 2831.250 kb on + strand, within BWI76_RS13575 at 2831.250 kb on + strand, within BWI76_RS13575 at 2831.302 kb on + strand, within BWI76_RS13575 at 2831.722 kb on + strand at 2831.739 kb on + strand at 2832.196 kb on - strand, within BWI76_RS13580 at 2832.609 kb on - strand, within BWI76_RS13585 at 2832.621 kb on + strand, within BWI76_RS13585 at 2832.631 kb on + strand, within BWI76_RS13585
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 3 mM remove 2,829,695 + BWI76_RS13570 0.42 -0.9 2,829,800 - BWI76_RS13570 0.51 -0.6 2,829,906 - BWI76_RS13570 0.60 -1.3 2,829,995 - BWI76_RS13570 0.67 -0.2 2,829,997 + BWI76_RS13570 0.68 +2.8 2,830,087 + BWI76_RS13570 0.75 +0.3 2,830,957 + BWI76_RS13575 0.27 +0.0 2,831,040 + BWI76_RS13575 0.35 +1.4 2,831,250 + BWI76_RS13575 0.56 -0.2 2,831,250 + BWI76_RS13575 0.56 -0.0 2,831,302 + BWI76_RS13575 0.61 +0.9 2,831,722 + +0.3 2,831,739 + -0.0 2,832,196 - BWI76_RS13580 0.65 -0.0 2,832,609 - BWI76_RS13585 0.57 -1.2 2,832,621 + BWI76_RS13585 0.62 +0.1 2,832,631 + BWI76_RS13585 0.66 +0.3
Or see this region's nucleotide sequence