Experiment: copper (II) chloride 3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS10860 and BWI76_RS10865 are separated by 288 nucleotides BWI76_RS10865 and BWI76_RS10870 are separated by 145 nucleotides BWI76_RS10870 and BWI76_RS10875 are separated by 20 nucleotides BWI76_RS10875 and BWI76_RS10880 are separated by 114 nucleotides
BWI76_RS10860: BWI76_RS10860 - ACR family transporter, at 2,294,529 to 2,297,603
_RS10860
BWI76_RS10865: BWI76_RS10865 - tRNA-Ser, at 2,297,892 to 2,297,979
_RS10865
BWI76_RS10870: BWI76_RS10870 - nicotinamidase, at 2,298,125 to 2,298,802
_RS10870
BWI76_RS10875: BWI76_RS10875 - quercetin 2,3-dioxygenase, at 2,298,823 to 2,299,683
_RS10875
BWI76_RS10880: BWI76_RS10880 - LysR family transcriptional regulator, at 2,299,798 to 2,300,703
_RS10880
Position (kb)
2298
2299 Strain fitness (log2 ratio)
-2
-1
0
1 at 2297.198 kb on + strand, within BWI76_RS10860 at 2297.455 kb on + strand at 2297.629 kb on - strand at 2298.029 kb on - strand at 2298.309 kb on - strand, within BWI76_RS10870 at 2298.319 kb on - strand, within BWI76_RS10870 at 2298.713 kb on - strand, within BWI76_RS10870 at 2298.951 kb on + strand, within BWI76_RS10875 at 2299.164 kb on - strand, within BWI76_RS10875 at 2299.447 kb on + strand, within BWI76_RS10875
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 3 mM remove 2,297,198 + BWI76_RS10860 0.87 -0.3 2,297,455 + +0.6 2,297,629 - -1.8 2,298,029 - -0.3 2,298,309 - BWI76_RS10870 0.27 +0.4 2,298,319 - BWI76_RS10870 0.29 +0.5 2,298,713 - BWI76_RS10870 0.87 +0.3 2,298,951 + BWI76_RS10875 0.15 -0.1 2,299,164 - BWI76_RS10875 0.40 -0.1 2,299,447 + BWI76_RS10875 0.72 +0.1
Or see this region's nucleotide sequence