Experiment: copper (II) chloride 3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS09985 and BWI76_RS09990 are separated by 17 nucleotides BWI76_RS09990 and BWI76_RS09995 are separated by 122 nucleotides BWI76_RS09995 and BWI76_RS10000 are separated by 28 nucleotides BWI76_RS10000 and BWI76_RS10005 are separated by 154 nucleotides
BWI76_RS09985: BWI76_RS09985 - membrane protein, at 2,101,229 to 2,103,364
_RS09985
BWI76_RS09990: BWI76_RS09990 - hypothetical protein, at 2,103,382 to 2,103,828
_RS09990
BWI76_RS09995: BWI76_RS09995 - DNA helicase IV, at 2,103,951 to 2,106,005
_RS09995
BWI76_RS10000: BWI76_RS10000 - methylglyoxal synthase, at 2,106,034 to 2,106,492
_RS10000
BWI76_RS10005: BWI76_RS10005 - CoA-binding protein, at 2,106,647 to 2,107,060
_RS10005
Position (kb)
2103
2104
2105
2106
2107 Strain fitness (log2 ratio)
-1
0
1
2 at 2103.116 kb on - strand, within BWI76_RS09985 at 2103.247 kb on + strand at 2103.452 kb on - strand, within BWI76_RS09990 at 2103.530 kb on - strand, within BWI76_RS09990 at 2103.679 kb on - strand, within BWI76_RS09990 at 2103.684 kb on - strand, within BWI76_RS09990 at 2103.684 kb on - strand, within BWI76_RS09990 at 2103.686 kb on - strand, within BWI76_RS09990 at 2103.710 kb on - strand, within BWI76_RS09990 at 2103.723 kb on - strand, within BWI76_RS09990 at 2103.724 kb on - strand, within BWI76_RS09990 at 2103.738 kb on + strand, within BWI76_RS09990 at 2103.803 kb on - strand at 2103.834 kb on - strand at 2103.838 kb on + strand at 2103.846 kb on - strand at 2103.859 kb on + strand at 2103.867 kb on - strand at 2104.006 kb on + strand at 2104.162 kb on + strand, within BWI76_RS09995 at 2104.205 kb on - strand, within BWI76_RS09995 at 2104.536 kb on - strand, within BWI76_RS09995 at 2104.760 kb on - strand, within BWI76_RS09995 at 2104.788 kb on - strand, within BWI76_RS09995 at 2104.921 kb on - strand, within BWI76_RS09995 at 2104.966 kb on - strand, within BWI76_RS09995 at 2105.437 kb on - strand, within BWI76_RS09995 at 2105.444 kb on + strand, within BWI76_RS09995 at 2105.444 kb on + strand, within BWI76_RS09995 at 2105.534 kb on - strand, within BWI76_RS09995 at 2105.879 kb on - strand at 2105.910 kb on + strand at 2105.910 kb on + strand at 2105.918 kb on - strand at 2105.918 kb on - strand at 2106.056 kb on - strand at 2106.128 kb on + strand, within BWI76_RS10000 at 2106.128 kb on + strand, within BWI76_RS10000 at 2106.197 kb on - strand, within BWI76_RS10000 at 2106.197 kb on - strand, within BWI76_RS10000 at 2106.269 kb on + strand, within BWI76_RS10000 at 2106.277 kb on - strand, within BWI76_RS10000 at 2106.323 kb on - strand, within BWI76_RS10000 at 2106.323 kb on - strand, within BWI76_RS10000 at 2106.323 kb on - strand, within BWI76_RS10000 at 2106.447 kb on + strand at 2106.455 kb on - strand at 2106.524 kb on - strand at 2106.582 kb on + strand at 2106.584 kb on - strand at 2106.626 kb on - strand at 2106.708 kb on - strand, within BWI76_RS10005 at 2106.708 kb on - strand, within BWI76_RS10005 at 2106.720 kb on - strand, within BWI76_RS10005 at 2106.772 kb on + strand, within BWI76_RS10005 at 2106.801 kb on + strand, within BWI76_RS10005 at 2106.804 kb on + strand, within BWI76_RS10005 at 2106.817 kb on - strand, within BWI76_RS10005 at 2106.882 kb on + strand, within BWI76_RS10005 at 2106.905 kb on + strand, within BWI76_RS10005 at 2106.949 kb on + strand, within BWI76_RS10005 at 2106.985 kb on - strand, within BWI76_RS10005 at 2106.998 kb on - strand, within BWI76_RS10005
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 3 mM remove 2,103,116 - BWI76_RS09985 0.88 -0.3 2,103,247 + -0.8 2,103,452 - BWI76_RS09990 0.16 -0.1 2,103,530 - BWI76_RS09990 0.33 +1.0 2,103,679 - BWI76_RS09990 0.66 -0.3 2,103,684 - BWI76_RS09990 0.68 -1.1 2,103,684 - BWI76_RS09990 0.68 -0.7 2,103,686 - BWI76_RS09990 0.68 -0.3 2,103,710 - BWI76_RS09990 0.73 -0.3 2,103,723 - BWI76_RS09990 0.76 +0.3 2,103,724 - BWI76_RS09990 0.77 +0.4 2,103,738 + BWI76_RS09990 0.80 +0.1 2,103,803 - +0.3 2,103,834 - +0.9 2,103,838 + +0.1 2,103,846 - +0.3 2,103,859 + -0.2 2,103,867 - -0.2 2,104,006 + +0.5 2,104,162 + BWI76_RS09995 0.10 +0.1 2,104,205 - BWI76_RS09995 0.12 -0.6 2,104,536 - BWI76_RS09995 0.28 +1.2 2,104,760 - BWI76_RS09995 0.39 +0.7 2,104,788 - BWI76_RS09995 0.41 +0.7 2,104,921 - BWI76_RS09995 0.47 +0.1 2,104,966 - BWI76_RS09995 0.49 -0.3 2,105,437 - BWI76_RS09995 0.72 +0.5 2,105,444 + BWI76_RS09995 0.73 +1.0 2,105,444 + BWI76_RS09995 0.73 +0.4 2,105,534 - BWI76_RS09995 0.77 +0.9 2,105,879 - -0.7 2,105,910 + -0.6 2,105,910 + +0.6 2,105,918 - +0.3 2,105,918 - +0.6 2,106,056 - -0.3 2,106,128 + BWI76_RS10000 0.20 +0.2 2,106,128 + BWI76_RS10000 0.20 -0.3 2,106,197 - BWI76_RS10000 0.36 -0.4 2,106,197 - BWI76_RS10000 0.36 -0.2 2,106,269 + BWI76_RS10000 0.51 -0.5 2,106,277 - BWI76_RS10000 0.53 +1.2 2,106,323 - BWI76_RS10000 0.63 -0.6 2,106,323 - BWI76_RS10000 0.63 -1.7 2,106,323 - BWI76_RS10000 0.63 +1.0 2,106,447 + +2.2 2,106,455 - +0.4 2,106,524 - +0.1 2,106,582 + +0.6 2,106,584 - -0.3 2,106,626 - -1.1 2,106,708 - BWI76_RS10005 0.15 -0.0 2,106,708 - BWI76_RS10005 0.15 -0.1 2,106,720 - BWI76_RS10005 0.18 +0.1 2,106,772 + BWI76_RS10005 0.30 +1.3 2,106,801 + BWI76_RS10005 0.37 -0.3 2,106,804 + BWI76_RS10005 0.38 +0.1 2,106,817 - BWI76_RS10005 0.41 +1.6 2,106,882 + BWI76_RS10005 0.57 +0.1 2,106,905 + BWI76_RS10005 0.62 +0.1 2,106,949 + BWI76_RS10005 0.73 +0.2 2,106,985 - BWI76_RS10005 0.82 -0.2 2,106,998 - BWI76_RS10005 0.85 -1.1
Or see this region's nucleotide sequence