Experiment: copper (II) chloride 3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS09495 and BWI76_RS09500 are separated by 217 nucleotides BWI76_RS09500 and BWI76_RS09505 are separated by 173 nucleotides BWI76_RS09505 and BWI76_RS09510 overlap by 1 nucleotides
BWI76_RS09495: BWI76_RS09495 - sensor histidine kinase, at 1,987,241 to 1,988,713
_RS09495
BWI76_RS09500: BWI76_RS09500 - arginine ABC transporter substrate-binding protein, at 1,988,931 to 1,989,662
_RS09500
BWI76_RS09505: BWI76_RS09505 - arginine transporter permease subunit ArtM, at 1,989,836 to 1,990,504
_RS09505
BWI76_RS09510: BWI76_RS09510 - arginine transporter permease subunit ArtQ, at 1,990,504 to 1,991,220
_RS09510
Position (kb) 1988
1989
1990 Strain fitness (log2 ratio) -1
0
1
2 at 1988.095 kb on - strand, within BWI76_RS09495 at 1989.346 kb on + strand, within BWI76_RS09500 at 1989.354 kb on - strand at 1989.493 kb on + strand, within BWI76_RS09500 at 1990.229 kb on + strand, within BWI76_RS09505 at 1990.365 kb on + strand, within BWI76_RS09505 at 1990.365 kb on + strand, within BWI76_RS09505
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 3 mM remove 1,988,095 - BWI76_RS09495 0.58 -1.5 1,989,346 + BWI76_RS09500 0.57 +1.0 1,989,354 - +1.9 1,989,493 + BWI76_RS09500 0.77 +0.4 1,990,229 + BWI76_RS09505 0.59 -0.8 1,990,365 + BWI76_RS09505 0.79 +0.7 1,990,365 + BWI76_RS09505 0.79 -0.0
Or see this region's nucleotide sequence