Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS08850

Experiment: copper (II) chloride 3 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS08845 and BWI76_RS08850 overlap by 1 nucleotidesBWI76_RS08850 and BWI76_RS08855 overlap by 4 nucleotidesBWI76_RS08855 and BWI76_RS08860 are separated by 143 nucleotides BWI76_RS08845: BWI76_RS08845 - hypothetical protein, at 1,862,159 to 1,863,127 _RS08845 BWI76_RS08850: BWI76_RS08850 - cardiolipin synthase B, at 1,863,127 to 1,864,371 _RS08850 BWI76_RS08855: BWI76_RS08855 - endonuclease/exonuclease/phosphatase, at 1,864,368 to 1,865,117 _RS08855 BWI76_RS08860: BWI76_RS08860 - hypothetical protein, at 1,865,261 to 1,865,671 _RS08860 Position (kb) 1863 1864 1865Strain fitness (log2 ratio) -1 0 1at 1862.127 kb on + strandat 1862.269 kb on - strand, within BWI76_RS08845at 1862.541 kb on - strand, within BWI76_RS08845at 1862.678 kb on - strand, within BWI76_RS08845at 1862.710 kb on + strand, within BWI76_RS08845at 1862.710 kb on + strand, within BWI76_RS08845at 1862.756 kb on + strand, within BWI76_RS08845at 1862.764 kb on - strand, within BWI76_RS08845at 1862.839 kb on + strand, within BWI76_RS08845at 1862.898 kb on - strand, within BWI76_RS08845at 1862.910 kb on + strand, within BWI76_RS08845at 1862.967 kb on + strand, within BWI76_RS08845at 1862.967 kb on + strand, within BWI76_RS08845at 1862.980 kb on - strand, within BWI76_RS08845at 1863.314 kb on + strand, within BWI76_RS08850at 1863.349 kb on + strand, within BWI76_RS08850at 1863.499 kb on - strand, within BWI76_RS08850at 1864.152 kb on + strand, within BWI76_RS08850at 1864.207 kb on - strand, within BWI76_RS08850at 1864.490 kb on - strand, within BWI76_RS08855at 1864.572 kb on - strand, within BWI76_RS08855at 1864.634 kb on + strand, within BWI76_RS08855

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Per-strain Table

Position Strand Gene LocusTag Fraction copper (II) chloride 3 mM
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1,862,127 + +0.2
1,862,269 - BWI76_RS08845 0.11 -0.3
1,862,541 - BWI76_RS08845 0.39 +0.6
1,862,678 - BWI76_RS08845 0.54 +0.6
1,862,710 + BWI76_RS08845 0.57 +0.2
1,862,710 + BWI76_RS08845 0.57 +0.6
1,862,756 + BWI76_RS08845 0.62 +0.1
1,862,764 - BWI76_RS08845 0.62 -0.2
1,862,839 + BWI76_RS08845 0.70 +0.3
1,862,898 - BWI76_RS08845 0.76 -0.2
1,862,910 + BWI76_RS08845 0.78 -0.1
1,862,967 + BWI76_RS08845 0.83 +0.5
1,862,967 + BWI76_RS08845 0.83 -0.1
1,862,980 - BWI76_RS08845 0.85 +0.2
1,863,314 + BWI76_RS08850 0.15 +1.1
1,863,349 + BWI76_RS08850 0.18 +0.4
1,863,499 - BWI76_RS08850 0.30 -0.2
1,864,152 + BWI76_RS08850 0.82 +0.3
1,864,207 - BWI76_RS08850 0.87 +0.2
1,864,490 - BWI76_RS08855 0.16 +0.0
1,864,572 - BWI76_RS08855 0.27 -0.2
1,864,634 + BWI76_RS08855 0.35 +0.4

Or see this region's nucleotide sequence