Experiment: copper (II) chloride 3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS01130 and BWI76_RS01135 are separated by 11 nucleotides BWI76_RS01135 and BWI76_RS01140 are separated by 240 nucleotides BWI76_RS01140 and BWI76_RS01145 are separated by 102 nucleotides BWI76_RS01145 and BWI76_RS01150 are separated by 55 nucleotides BWI76_RS01150 and BWI76_RS01155 are separated by 22 nucleotides BWI76_RS01155 and BWI76_RS01160 are separated by 45 nucleotides
BWI76_RS01130: BWI76_RS01130 - enterobacterial common antigen polymerase, at 232,899 to 234,245
_RS01130
BWI76_RS01135: BWI76_RS01135 - lipopolysaccharide N-acetylmannosaminouronosyltransferase, at 234,257 to 234,997
_RS01135
BWI76_RS01140: BWI76_RS01140 - amino acid permease, at 235,238 to 236,623
_RS01140
BWI76_RS01145: BWI76_RS01145 - tRNA-Arg, at 236,726 to 236,802
_RS01145
BWI76_RS01150: BWI76_RS01150 - tRNA-His, at 236,858 to 236,933
_RS01150
BWI76_RS01155: BWI76_RS01155 - tRNA-Leu, at 236,956 to 237,042
_RS01155
BWI76_RS01160: BWI76_RS01160 - tRNA-Pro, at 237,088 to 237,164
_RS01160
Position (kb) 235
236
237 Strain fitness (log2 ratio) -2
-1
0
1
2 at 234.278 kb on - strand at 234.297 kb on - strand at 234.607 kb on + strand, within BWI76_RS01135 at 234.644 kb on - strand, within BWI76_RS01135 at 234.795 kb on + strand, within BWI76_RS01135 at 234.820 kb on + strand, within BWI76_RS01135 at 234.820 kb on + strand, within BWI76_RS01135 at 234.820 kb on + strand, within BWI76_RS01135 at 234.828 kb on - strand, within BWI76_RS01135 at 234.839 kb on + strand, within BWI76_RS01135 at 234.986 kb on + strand at 235.121 kb on + strand at 235.121 kb on + strand at 235.121 kb on + strand at 235.124 kb on - strand at 235.129 kb on - strand at 235.183 kb on - strand at 235.185 kb on + strand at 235.188 kb on - strand at 235.200 kb on - strand at 235.210 kb on - strand at 235.216 kb on - strand at 235.216 kb on - strand at 235.216 kb on - strand at 235.218 kb on + strand at 235.227 kb on - strand at 235.298 kb on + strand at 235.346 kb on + strand at 235.585 kb on + strand, within BWI76_RS01140 at 235.701 kb on + strand, within BWI76_RS01140 at 235.710 kb on - strand, within BWI76_RS01140 at 235.742 kb on - strand, within BWI76_RS01140 at 235.755 kb on + strand, within BWI76_RS01140 at 235.869 kb on + strand, within BWI76_RS01140 at 236.038 kb on - strand, within BWI76_RS01140 at 236.051 kb on + strand, within BWI76_RS01140 at 236.144 kb on + strand, within BWI76_RS01140 at 236.152 kb on - strand, within BWI76_RS01140 at 236.154 kb on - strand, within BWI76_RS01140 at 236.297 kb on - strand, within BWI76_RS01140 at 236.331 kb on - strand, within BWI76_RS01140 at 236.497 kb on + strand at 236.556 kb on - strand at 237.382 kb on - strand at 237.411 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 3 mM remove 234,278 - -1.3 234,297 - +2.1 234,607 + BWI76_RS01135 0.47 -0.0 234,644 - BWI76_RS01135 0.52 -0.7 234,795 + BWI76_RS01135 0.73 -1.3 234,820 + BWI76_RS01135 0.76 -0.7 234,820 + BWI76_RS01135 0.76 -0.3 234,820 + BWI76_RS01135 0.76 -0.7 234,828 - BWI76_RS01135 0.77 +0.1 234,839 + BWI76_RS01135 0.79 -0.1 234,986 + -0.5 235,121 + +0.2 235,121 + -0.3 235,121 + +0.5 235,124 - +1.5 235,129 - +0.5 235,183 - -1.4 235,185 + -1.6 235,188 - +0.5 235,200 - -0.1 235,210 - +0.7 235,216 - +0.4 235,216 - +0.6 235,216 - +1.2 235,218 + -1.2 235,227 - -0.1 235,298 + -0.2 235,346 + -0.1 235,585 + BWI76_RS01140 0.25 +0.3 235,701 + BWI76_RS01140 0.33 -2.5 235,710 - BWI76_RS01140 0.34 -0.8 235,742 - BWI76_RS01140 0.36 +0.9 235,755 + BWI76_RS01140 0.37 +0.2 235,869 + BWI76_RS01140 0.46 +0.9 236,038 - BWI76_RS01140 0.58 +0.3 236,051 + BWI76_RS01140 0.59 +0.4 236,144 + BWI76_RS01140 0.65 +1.4 236,152 - BWI76_RS01140 0.66 +0.0 236,154 - BWI76_RS01140 0.66 +0.2 236,297 - BWI76_RS01140 0.76 +0.8 236,331 - BWI76_RS01140 0.79 -0.2 236,497 + +0.2 236,556 - +1.3 237,382 - -0.1 237,411 + -0.1
Or see this region's nucleotide sequence