Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_3137 and DvMF_3138 overlap by 4 nucleotides DvMF_3138 and DvMF_3139 are separated by 6 nucleotides DvMF_3139 and DvMF_3140 are separated by 335 nucleotides
DvMF_3137: DvMF_3137 - ABC transporter related (RefSeq), at 3,957,156 to 3,957,989
_3137
DvMF_3138: DvMF_3138 - cobalt ABC transporter, inner membrane subunit CbiQ (RefSeq), at 3,957,986 to 3,958,783
_3138
DvMF_3139: DvMF_3139 - cobalt transport protein CbiM (RefSeq), at 3,958,790 to 3,959,404
_3139
DvMF_3140: DvMF_3140 - Citrate transporter (RefSeq), at 3,959,740 to 3,961,173
_3140
Position (kb)
3957
3958
3959 Strain fitness (log2 ratio)
-1
0
1
2 at 3957.020 kb on + strand at 3957.039 kb on - strand at 3957.171 kb on - strand at 3957.243 kb on - strand, within DvMF_3137 at 3957.308 kb on + strand, within DvMF_3137 at 3957.384 kb on + strand, within DvMF_3137 at 3957.384 kb on + strand, within DvMF_3137 at 3957.663 kb on + strand, within DvMF_3137 at 3957.837 kb on + strand, within DvMF_3137 at 3958.045 kb on + strand at 3958.045 kb on + strand at 3958.053 kb on - strand at 3958.139 kb on - strand, within DvMF_3138 at 3958.363 kb on - strand, within DvMF_3138 at 3958.832 kb on + strand at 3959.000 kb on + strand, within DvMF_3139 at 3959.083 kb on - strand, within DvMF_3139 at 3959.124 kb on + strand, within DvMF_3139 at 3959.399 kb on + strand at 3959.474 kb on + strand at 3959.629 kb on + strand at 3959.652 kb on + strand at 3959.750 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 3,957,020 + -0.5 3,957,039 - +0.1 3,957,171 - -0.3 3,957,243 - DvMF_3137 0.10 -0.4 3,957,308 + DvMF_3137 0.18 -0.8 3,957,384 + DvMF_3137 0.27 -1.2 3,957,384 + DvMF_3137 0.27 -1.0 3,957,663 + DvMF_3137 0.61 -0.6 3,957,837 + DvMF_3137 0.82 -0.3 3,958,045 + -0.2 3,958,045 + +2.0 3,958,053 - -0.4 3,958,139 - DvMF_3138 0.19 -1.1 3,958,363 - DvMF_3138 0.47 -0.8 3,958,832 + -1.0 3,959,000 + DvMF_3139 0.34 -0.9 3,959,083 - DvMF_3139 0.48 -1.2 3,959,124 + DvMF_3139 0.54 -0.6 3,959,399 + -0.9 3,959,474 + -0.5 3,959,629 + -0.3 3,959,652 + -0.3 3,959,750 - -0.4
Or see this region's nucleotide sequence