Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_3116 and DvMF_3117 are separated by 167 nucleotides DvMF_3117 and DvMF_3118 are separated by 3 nucleotides DvMF_3118 and DvMF_3119 are separated by 200 nucleotides
DvMF_3116: DvMF_3116 - methyl-accepting chemotaxis sensory transducer with Cache sensor (RefSeq), at 3,932,496 to 3,934,916
_3116
DvMF_3117: DvMF_3117 - hypothetical protein (RefSeq), at 3,935,084 to 3,935,626
_3117
DvMF_3118: DvMF_3118 - Gamma-glutamyltransferase (RefSeq), at 3,935,630 to 3,937,249
_3118
DvMF_3119: DvMF_3119 - protein of unknown function DUF181 (RefSeq), at 3,937,450 to 3,939,222
_3119
Position (kb)
3935
3936
3937
3938 Strain fitness (log2 ratio)
-1
0
1 at 3934.697 kb on + strand at 3934.870 kb on + strand at 3934.922 kb on + strand at 3935.003 kb on + strand at 3935.104 kb on + strand at 3935.312 kb on - strand, within DvMF_3117 at 3935.662 kb on + strand at 3935.719 kb on - strand at 3936.037 kb on + strand, within DvMF_3118 at 3936.314 kb on - strand, within DvMF_3118 at 3936.541 kb on - strand, within DvMF_3118 at 3936.694 kb on + strand, within DvMF_3118 at 3936.782 kb on + strand, within DvMF_3118 at 3936.854 kb on + strand, within DvMF_3118 at 3936.955 kb on + strand, within DvMF_3118 at 3936.967 kb on + strand, within DvMF_3118 at 3937.183 kb on - strand at 3937.281 kb on + strand at 3937.325 kb on - strand at 3937.422 kb on + strand at 3937.630 kb on - strand, within DvMF_3119 at 3937.969 kb on + strand, within DvMF_3119
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 3,934,697 + -0.6 3,934,870 + -0.4 3,934,922 + -0.2 3,935,003 + +0.0 3,935,104 + -0.6 3,935,312 - DvMF_3117 0.42 -0.0 3,935,662 + -0.4 3,935,719 - -0.3 3,936,037 + DvMF_3118 0.25 -0.8 3,936,314 - DvMF_3118 0.42 -0.3 3,936,541 - DvMF_3118 0.56 +0.1 3,936,694 + DvMF_3118 0.66 -0.4 3,936,782 + DvMF_3118 0.71 -0.4 3,936,854 + DvMF_3118 0.76 -0.6 3,936,955 + DvMF_3118 0.82 -0.5 3,936,967 + DvMF_3118 0.83 -0.4 3,937,183 - -0.3 3,937,281 + +0.2 3,937,325 - -0.5 3,937,422 + -0.7 3,937,630 - DvMF_3119 0.10 -1.4 3,937,969 + DvMF_3119 0.29 +0.4
Or see this region's nucleotide sequence