Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_3071 and DvMF_3072 are separated by 550 nucleotides DvMF_3072 and DvMF_3073 are separated by 321 nucleotides
DvMF_3071: DvMF_3071 - type IV pilus assembly PilZ (RefSeq), at 3,876,615 to 3,877,106
_3071
DvMF_3072: DvMF_3072 - two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq), at 3,877,657 to 3,879,486
_3072
DvMF_3073: DvMF_3073 - methyl-accepting chemotaxis sensory transducer (RefSeq), at 3,879,808 to 3,881,841
_3073
Position (kb)
3877
3878
3879
3880 Strain fitness (log2 ratio)
-1
0
1 at 3876.865 kb on + strand, within DvMF_3071 at 3877.263 kb on + strand at 3877.271 kb on - strand at 3877.577 kb on + strand at 3877.689 kb on + strand at 3877.977 kb on - strand, within DvMF_3072 at 3878.237 kb on + strand, within DvMF_3072 at 3878.775 kb on + strand, within DvMF_3072 at 3878.971 kb on - strand, within DvMF_3072 at 3879.115 kb on - strand, within DvMF_3072 at 3879.222 kb on + strand, within DvMF_3072 at 3879.361 kb on - strand at 3879.531 kb on + strand at 3879.538 kb on + strand at 3879.617 kb on + strand at 3879.889 kb on + strand at 3879.897 kb on - strand at 3879.897 kb on - strand at 3879.937 kb on + strand at 3880.135 kb on + strand, within DvMF_3073 at 3880.355 kb on + strand, within DvMF_3073 at 3880.381 kb on - strand, within DvMF_3073 at 3880.461 kb on - strand, within DvMF_3073 at 3880.471 kb on + strand, within DvMF_3073 at 3880.471 kb on - strand, within DvMF_3073
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 3,876,865 + DvMF_3071 0.51 +0.1 3,877,263 + -0.4 3,877,271 - -0.5 3,877,577 + +0.3 3,877,689 + +0.5 3,877,977 - DvMF_3072 0.17 -0.1 3,878,237 + DvMF_3072 0.32 +0.1 3,878,775 + DvMF_3072 0.61 +0.2 3,878,971 - DvMF_3072 0.72 +0.2 3,879,115 - DvMF_3072 0.80 +0.2 3,879,222 + DvMF_3072 0.86 +0.4 3,879,361 - +0.8 3,879,531 + -0.4 3,879,538 + -0.1 3,879,617 + -0.4 3,879,889 + -0.3 3,879,897 - -0.1 3,879,897 - -0.2 3,879,937 + -1.4 3,880,135 + DvMF_3073 0.16 +0.7 3,880,355 + DvMF_3073 0.27 -0.0 3,880,381 - DvMF_3073 0.28 -0.3 3,880,461 - DvMF_3073 0.32 -0.4 3,880,471 + DvMF_3073 0.33 -0.3 3,880,471 - DvMF_3073 0.33 -0.5
Or see this region's nucleotide sequence