Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_3019 and DvMF_3020 are separated by 398 nucleotides DvMF_3020 and DvMF_3021 are separated by 378 nucleotides
DvMF_3019: DvMF_3019 - glycosyl transferase group 1 (RefSeq), at 3,809,053 to 3,810,165
_3019
DvMF_3020: DvMF_3020 - two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq), at 3,810,564 to 3,812,063
_3020
DvMF_3021: DvMF_3021 - aconitate hydratase (RefSeq), at 3,812,442 to 3,814,367
_3021
Position (kb)
3810
3811
3812
3813 Strain fitness (log2 ratio)
-1
0
1
2 at 3809.701 kb on - strand, within DvMF_3019 at 3809.729 kb on + strand, within DvMF_3019 at 3809.847 kb on + strand, within DvMF_3019 at 3809.847 kb on + strand, within DvMF_3019 at 3810.000 kb on + strand, within DvMF_3019 at 3810.051 kb on + strand, within DvMF_3019 at 3810.263 kb on + strand at 3810.268 kb on + strand at 3810.293 kb on - strand at 3810.537 kb on + strand at 3810.544 kb on - strand at 3810.566 kb on - strand at 3810.566 kb on - strand at 3810.673 kb on - strand at 3810.673 kb on - strand at 3810.825 kb on - strand, within DvMF_3020 at 3810.827 kb on - strand, within DvMF_3020 at 3810.860 kb on + strand, within DvMF_3020 at 3810.964 kb on + strand, within DvMF_3020 at 3811.163 kb on - strand, within DvMF_3020 at 3811.258 kb on - strand, within DvMF_3020 at 3811.461 kb on + strand, within DvMF_3020 at 3811.493 kb on + strand, within DvMF_3020 at 3811.501 kb on - strand, within DvMF_3020 at 3811.705 kb on + strand, within DvMF_3020 at 3811.981 kb on + strand at 3812.092 kb on - strand at 3812.097 kb on - strand at 3812.189 kb on + strand at 3812.285 kb on + strand at 3812.641 kb on - strand, within DvMF_3021 at 3813.037 kb on + strand, within DvMF_3021
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 3,809,701 - DvMF_3019 0.58 -0.1 3,809,729 + DvMF_3019 0.61 -0.2 3,809,847 + DvMF_3019 0.71 -0.1 3,809,847 + DvMF_3019 0.71 +0.4 3,810,000 + DvMF_3019 0.85 +0.1 3,810,051 + DvMF_3019 0.90 -0.5 3,810,263 + -0.2 3,810,268 + -0.4 3,810,293 - +2.1 3,810,537 + +0.7 3,810,544 - +0.4 3,810,566 - +0.9 3,810,566 - -0.2 3,810,673 - +0.6 3,810,673 - +0.7 3,810,825 - DvMF_3020 0.17 +0.5 3,810,827 - DvMF_3020 0.18 +0.7 3,810,860 + DvMF_3020 0.20 +0.7 3,810,964 + DvMF_3020 0.27 +0.7 3,811,163 - DvMF_3020 0.40 +0.5 3,811,258 - DvMF_3020 0.46 +0.7 3,811,461 + DvMF_3020 0.60 +0.9 3,811,493 + DvMF_3020 0.62 +0.6 3,811,501 - DvMF_3020 0.62 +0.8 3,811,705 + DvMF_3020 0.76 +0.8 3,811,981 + +0.7 3,812,092 - -1.4 3,812,097 - -1.0 3,812,189 + -0.4 3,812,285 + -0.5 3,812,641 - DvMF_3021 0.10 -1.5 3,813,037 + DvMF_3021 0.31 -0.5
Or see this region's nucleotide sequence