Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_3017 and DvMF_3018 overlap by 4 nucleotides DvMF_3018 and DvMF_3019 are separated by 68 nucleotides
DvMF_3017: DvMF_3017 - glycosyl transferase group 1 (RefSeq), at 3,806,565 to 3,807,647
_3017
DvMF_3018: DvMF_3018 - O-antigen polymerase (RefSeq), at 3,807,644 to 3,808,984
_3018
DvMF_3019: DvMF_3019 - glycosyl transferase group 1 (RefSeq), at 3,809,053 to 3,810,165
_3019
Position (kb)
3807
3808
3809 Strain fitness (log2 ratio)
-1
0
1
2 at 3806.665 kb on + strand at 3806.797 kb on + strand, within DvMF_3017 at 3806.797 kb on - strand, within DvMF_3017 at 3806.845 kb on + strand, within DvMF_3017 at 3806.869 kb on + strand, within DvMF_3017 at 3806.877 kb on - strand, within DvMF_3017 at 3806.877 kb on - strand, within DvMF_3017 at 3806.987 kb on + strand, within DvMF_3017 at 3807.196 kb on + strand, within DvMF_3017 at 3807.216 kb on + strand, within DvMF_3017 at 3807.533 kb on - strand, within DvMF_3017 at 3807.689 kb on + strand at 3807.819 kb on + strand, within DvMF_3018 at 3807.989 kb on - strand, within DvMF_3018 at 3808.018 kb on + strand, within DvMF_3018 at 3808.077 kb on + strand, within DvMF_3018 at 3808.551 kb on + strand, within DvMF_3018 at 3808.612 kb on + strand, within DvMF_3018 at 3808.615 kb on - strand, within DvMF_3018 at 3808.671 kb on - strand, within DvMF_3018 at 3808.689 kb on - strand, within DvMF_3018 at 3808.795 kb on + strand, within DvMF_3018 at 3808.857 kb on + strand at 3809.265 kb on + strand, within DvMF_3019 at 3809.311 kb on + strand, within DvMF_3019 at 3809.311 kb on + strand, within DvMF_3019 at 3809.311 kb on + strand, within DvMF_3019 at 3809.311 kb on + strand, within DvMF_3019 at 3809.319 kb on - strand, within DvMF_3019 at 3809.319 kb on - strand, within DvMF_3019 at 3809.319 kb on - strand, within DvMF_3019 at 3809.319 kb on - strand, within DvMF_3019 at 3809.323 kb on + strand, within DvMF_3019 at 3809.368 kb on + strand, within DvMF_3019 at 3809.550 kb on + strand, within DvMF_3019 at 3809.701 kb on - strand, within DvMF_3019 at 3809.729 kb on + strand, within DvMF_3019 at 3809.847 kb on + strand, within DvMF_3019 at 3809.847 kb on + strand, within DvMF_3019
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 3,806,665 + +1.5 3,806,797 + DvMF_3017 0.21 -0.1 3,806,797 - DvMF_3017 0.21 -0.0 3,806,845 + DvMF_3017 0.26 +0.5 3,806,869 + DvMF_3017 0.28 +1.8 3,806,877 - DvMF_3017 0.29 +0.4 3,806,877 - DvMF_3017 0.29 +0.6 3,806,987 + DvMF_3017 0.39 -1.0 3,807,196 + DvMF_3017 0.58 +0.5 3,807,216 + DvMF_3017 0.60 -0.1 3,807,533 - DvMF_3017 0.89 +1.2 3,807,689 + -0.3 3,807,819 + DvMF_3018 0.13 +0.4 3,807,989 - DvMF_3018 0.26 +0.5 3,808,018 + DvMF_3018 0.28 -0.1 3,808,077 + DvMF_3018 0.32 +0.4 3,808,551 + DvMF_3018 0.68 +0.2 3,808,612 + DvMF_3018 0.72 +1.8 3,808,615 - DvMF_3018 0.72 +0.9 3,808,671 - DvMF_3018 0.77 -0.0 3,808,689 - DvMF_3018 0.78 +0.6 3,808,795 + DvMF_3018 0.86 +1.8 3,808,857 + +0.0 3,809,265 + DvMF_3019 0.19 -0.1 3,809,311 + DvMF_3019 0.23 -0.9 3,809,311 + DvMF_3019 0.23 -0.2 3,809,311 + DvMF_3019 0.23 -0.3 3,809,311 + DvMF_3019 0.23 -0.8 3,809,319 - DvMF_3019 0.24 +0.5 3,809,319 - DvMF_3019 0.24 -0.3 3,809,319 - DvMF_3019 0.24 -0.5 3,809,319 - DvMF_3019 0.24 -0.3 3,809,323 + DvMF_3019 0.24 -0.5 3,809,368 + DvMF_3019 0.28 -0.1 3,809,550 + DvMF_3019 0.45 -0.3 3,809,701 - DvMF_3019 0.58 -0.1 3,809,729 + DvMF_3019 0.61 -0.2 3,809,847 + DvMF_3019 0.71 -0.1 3,809,847 + DvMF_3019 0.71 +0.4
Or see this region's nucleotide sequence