Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_3016 and DvMF_3017 are separated by 103 nucleotides DvMF_3017 and DvMF_3018 overlap by 4 nucleotides
DvMF_3016: DvMF_3016 - glycosyl transferase group 1 (RefSeq), at 3,805,340 to 3,806,461
_3016
DvMF_3017: DvMF_3017 - glycosyl transferase group 1 (RefSeq), at 3,806,565 to 3,807,647
_3017
DvMF_3018: DvMF_3018 - O-antigen polymerase (RefSeq), at 3,807,644 to 3,808,984
_3018
Position (kb)
3806
3807
3808 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3805.694 kb on - strand, within DvMF_3016 at 3805.737 kb on - strand, within DvMF_3016 at 3805.804 kb on - strand, within DvMF_3016 at 3805.857 kb on - strand, within DvMF_3016 at 3805.870 kb on + strand, within DvMF_3016 at 3805.892 kb on + strand, within DvMF_3016 at 3805.942 kb on - strand, within DvMF_3016 at 3806.139 kb on - strand, within DvMF_3016 at 3806.258 kb on - strand, within DvMF_3016 at 3806.304 kb on + strand, within DvMF_3016 at 3806.312 kb on - strand, within DvMF_3016 at 3806.312 kb on - strand, within DvMF_3016 at 3806.335 kb on + strand, within DvMF_3016 at 3806.343 kb on - strand, within DvMF_3016 at 3806.603 kb on + strand at 3806.665 kb on + strand at 3806.797 kb on + strand, within DvMF_3017 at 3806.797 kb on - strand, within DvMF_3017 at 3806.845 kb on + strand, within DvMF_3017 at 3806.869 kb on + strand, within DvMF_3017 at 3806.877 kb on - strand, within DvMF_3017 at 3806.877 kb on - strand, within DvMF_3017 at 3806.987 kb on + strand, within DvMF_3017 at 3807.196 kb on + strand, within DvMF_3017 at 3807.216 kb on + strand, within DvMF_3017 at 3807.533 kb on - strand, within DvMF_3017 at 3807.689 kb on + strand at 3807.819 kb on + strand, within DvMF_3018 at 3807.989 kb on - strand, within DvMF_3018 at 3808.018 kb on + strand, within DvMF_3018 at 3808.077 kb on + strand, within DvMF_3018 at 3808.551 kb on + strand, within DvMF_3018 at 3808.612 kb on + strand, within DvMF_3018 at 3808.615 kb on - strand, within DvMF_3018
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 3,805,694 - DvMF_3016 0.32 -0.9 3,805,737 - DvMF_3016 0.35 -2.2 3,805,804 - DvMF_3016 0.41 -0.7 3,805,857 - DvMF_3016 0.46 -2.3 3,805,870 + DvMF_3016 0.47 -2.0 3,805,892 + DvMF_3016 0.49 -0.8 3,805,942 - DvMF_3016 0.54 -0.3 3,806,139 - DvMF_3016 0.71 -2.8 3,806,258 - DvMF_3016 0.82 -1.3 3,806,304 + DvMF_3016 0.86 -1.3 3,806,312 - DvMF_3016 0.87 -1.6 3,806,312 - DvMF_3016 0.87 -0.1 3,806,335 + DvMF_3016 0.89 -0.7 3,806,343 - DvMF_3016 0.89 -1.8 3,806,603 + +0.6 3,806,665 + +1.5 3,806,797 + DvMF_3017 0.21 -0.1 3,806,797 - DvMF_3017 0.21 -0.0 3,806,845 + DvMF_3017 0.26 +0.5 3,806,869 + DvMF_3017 0.28 +1.8 3,806,877 - DvMF_3017 0.29 +0.4 3,806,877 - DvMF_3017 0.29 +0.6 3,806,987 + DvMF_3017 0.39 -1.0 3,807,196 + DvMF_3017 0.58 +0.5 3,807,216 + DvMF_3017 0.60 -0.1 3,807,533 - DvMF_3017 0.89 +1.2 3,807,689 + -0.3 3,807,819 + DvMF_3018 0.13 +0.4 3,807,989 - DvMF_3018 0.26 +0.5 3,808,018 + DvMF_3018 0.28 -0.1 3,808,077 + DvMF_3018 0.32 +0.4 3,808,551 + DvMF_3018 0.68 +0.2 3,808,612 + DvMF_3018 0.72 +1.8 3,808,615 - DvMF_3018 0.72 +0.9
Or see this region's nucleotide sequence