Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2928 and DvMF_2929 are separated by 183 nucleotides DvMF_2929 and DvMF_2930 are separated by 153 nucleotides
DvMF_2928: DvMF_2928 - Methicillin resistance protein (RefSeq), at 3,699,108 to 3,700,340
_2928
DvMF_2929: DvMF_2929 - hydroxypyruvate isomerase (RefSeq), at 3,700,524 to 3,701,315
_2929
DvMF_2930: DvMF_2930 - transcriptional regulator, GntR family (RefSeq), at 3,701,469 to 3,702,350
_2930
Position (kb)
3700
3701
3702 Strain fitness (log2 ratio)
-1
0
1
2 at 3699.526 kb on - strand, within DvMF_2928 at 3699.562 kb on - strand, within DvMF_2928 at 3699.572 kb on + strand, within DvMF_2928 at 3699.651 kb on - strand, within DvMF_2928 at 3699.704 kb on + strand, within DvMF_2928 at 3699.712 kb on - strand, within DvMF_2928 at 3699.798 kb on - strand, within DvMF_2928 at 3699.849 kb on + strand, within DvMF_2928 at 3699.857 kb on - strand, within DvMF_2928 at 3699.869 kb on + strand, within DvMF_2928 at 3699.976 kb on - strand, within DvMF_2928 at 3700.039 kb on - strand, within DvMF_2928 at 3700.066 kb on - strand, within DvMF_2928 at 3700.066 kb on - strand, within DvMF_2928 at 3700.066 kb on - strand, within DvMF_2928 at 3700.289 kb on + strand at 3700.398 kb on + strand at 3700.402 kb on - strand at 3700.435 kb on - strand at 3700.530 kb on - strand at 3701.037 kb on - strand, within DvMF_2929 at 3701.060 kb on - strand, within DvMF_2929 at 3701.088 kb on - strand, within DvMF_2929 at 3701.159 kb on - strand, within DvMF_2929 at 3701.321 kb on + strand at 3701.360 kb on - strand at 3701.431 kb on - strand at 3701.476 kb on + strand at 3701.597 kb on + strand, within DvMF_2930 at 3701.605 kb on - strand, within DvMF_2930 at 3701.624 kb on + strand, within DvMF_2930 at 3702.089 kb on + strand, within DvMF_2930 at 3702.161 kb on - strand, within DvMF_2930 at 3702.263 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 3,699,526 - DvMF_2928 0.34 +0.2 3,699,562 - DvMF_2928 0.37 -0.4 3,699,572 + DvMF_2928 0.38 -0.5 3,699,651 - DvMF_2928 0.44 +0.4 3,699,704 + DvMF_2928 0.48 -0.2 3,699,712 - DvMF_2928 0.49 -0.3 3,699,798 - DvMF_2928 0.56 -0.4 3,699,849 + DvMF_2928 0.60 -0.1 3,699,857 - DvMF_2928 0.61 -0.3 3,699,869 + DvMF_2928 0.62 -0.3 3,699,976 - DvMF_2928 0.70 -0.5 3,700,039 - DvMF_2928 0.76 +0.5 3,700,066 - DvMF_2928 0.78 -0.4 3,700,066 - DvMF_2928 0.78 -0.3 3,700,066 - DvMF_2928 0.78 -0.2 3,700,289 + -0.7 3,700,398 + +0.4 3,700,402 - -0.5 3,700,435 - -1.6 3,700,530 - -0.6 3,701,037 - DvMF_2929 0.65 +2.1 3,701,060 - DvMF_2929 0.68 -0.5 3,701,088 - DvMF_2929 0.71 -0.3 3,701,159 - DvMF_2929 0.80 -0.8 3,701,321 + -0.3 3,701,360 - -0.3 3,701,431 - -0.5 3,701,476 + -0.6 3,701,597 + DvMF_2930 0.15 -0.3 3,701,605 - DvMF_2930 0.15 -0.4 3,701,624 + DvMF_2930 0.18 -0.5 3,702,089 + DvMF_2930 0.70 -0.5 3,702,161 - DvMF_2930 0.78 -0.4 3,702,263 - -0.3
Or see this region's nucleotide sequence