Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2644 and DvMF_2645 are separated by 110 nucleotides DvMF_2645 and DvMF_2646 are separated by 105 nucleotides
DvMF_2644: DvMF_2644 - putative two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq), at 3,345,182 to 3,347,155
_2644
DvMF_2645: DvMF_2645 - peptidase U32 (RefSeq), at 3,347,266 to 3,348,558
_2645
DvMF_2646: DvMF_2646 - PHP domain protein (RefSeq), at 3,348,664 to 3,349,548
_2646
Position (kb)
3347
3348
3349 Strain fitness (log2 ratio)
-1
0
1 at 3346.283 kb on - strand, within DvMF_2644 at 3346.382 kb on - strand, within DvMF_2644 at 3346.466 kb on - strand, within DvMF_2644 at 3346.748 kb on - strand, within DvMF_2644 at 3346.838 kb on - strand, within DvMF_2644 at 3346.854 kb on + strand, within DvMF_2644 at 3346.902 kb on - strand, within DvMF_2644 at 3347.081 kb on + strand at 3347.311 kb on + strand at 3347.317 kb on - strand at 3347.432 kb on - strand, within DvMF_2645 at 3347.516 kb on - strand, within DvMF_2645 at 3347.924 kb on - strand, within DvMF_2645 at 3348.026 kb on + strand, within DvMF_2645 at 3348.098 kb on + strand, within DvMF_2645 at 3348.306 kb on - strand, within DvMF_2645 at 3348.573 kb on + strand at 3348.581 kb on - strand at 3348.696 kb on + strand at 3348.696 kb on + strand at 3348.704 kb on - strand at 3348.838 kb on - strand, within DvMF_2646 at 3348.919 kb on + strand, within DvMF_2646 at 3348.965 kb on + strand, within DvMF_2646 at 3349.405 kb on + strand, within DvMF_2646
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 3,346,283 - DvMF_2644 0.56 -0.7 3,346,382 - DvMF_2644 0.61 -0.6 3,346,466 - DvMF_2644 0.65 -0.8 3,346,748 - DvMF_2644 0.79 -0.6 3,346,838 - DvMF_2644 0.84 -0.8 3,346,854 + DvMF_2644 0.85 -1.2 3,346,902 - DvMF_2644 0.87 -0.6 3,347,081 + -0.4 3,347,311 + +0.1 3,347,317 - +0.4 3,347,432 - DvMF_2645 0.13 +0.0 3,347,516 - DvMF_2645 0.19 +0.5 3,347,924 - DvMF_2645 0.51 +0.2 3,348,026 + DvMF_2645 0.59 -0.1 3,348,098 + DvMF_2645 0.64 +0.6 3,348,306 - DvMF_2645 0.80 -0.3 3,348,573 + +0.1 3,348,581 - -0.8 3,348,696 + -0.3 3,348,696 + -0.2 3,348,704 - -0.2 3,348,838 - DvMF_2646 0.20 -0.3 3,348,919 + DvMF_2646 0.29 -0.1 3,348,965 + DvMF_2646 0.34 -0.0 3,349,405 + DvMF_2646 0.84 -0.4
Or see this region's nucleotide sequence