Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2557 and DvMF_2558 are separated by 632 nucleotides DvMF_2558 and DvMF_2559 are separated by 519 nucleotides
DvMF_2557: DvMF_2557 - hypothetical protein (RefSeq), at 3,231,147 to 3,232,502
_2557
DvMF_2558: DvMF_2558 - hypothetical protein (RefSeq), at 3,233,135 to 3,234,550
_2558
DvMF_2559: DvMF_2559 - hypothetical protein (RefSeq), at 3,235,070 to 3,235,828
_2559
Position (kb)
3233
3234
3235 Strain fitness (log2 ratio)
-1
0
1
2 at 3232.858 kb on + strand at 3233.051 kb on + strand at 3233.066 kb on + strand at 3233.074 kb on - strand at 3233.076 kb on + strand at 3233.076 kb on + strand at 3233.076 kb on + strand at 3233.155 kb on + strand at 3233.400 kb on + strand, within DvMF_2558 at 3233.444 kb on - strand, within DvMF_2558 at 3233.574 kb on + strand, within DvMF_2558 at 3233.579 kb on + strand, within DvMF_2558 at 3233.905 kb on - strand, within DvMF_2558 at 3234.079 kb on - strand, within DvMF_2558 at 3234.090 kb on + strand, within DvMF_2558 at 3234.330 kb on + strand, within DvMF_2558 at 3234.416 kb on - strand at 3234.552 kb on - strand at 3234.775 kb on - strand at 3235.216 kb on - strand, within DvMF_2559 at 3235.266 kb on - strand, within DvMF_2559 at 3235.325 kb on + strand, within DvMF_2559 at 3235.325 kb on + strand, within DvMF_2559 at 3235.333 kb on - strand, within DvMF_2559 at 3235.333 kb on - strand, within DvMF_2559 at 3235.346 kb on - strand, within DvMF_2559 at 3235.451 kb on - strand, within DvMF_2559
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 3,232,858 + -0.4 3,233,051 + -0.3 3,233,066 + +0.3 3,233,074 - -0.5 3,233,076 + -0.4 3,233,076 + -0.4 3,233,076 + -0.1 3,233,155 + +0.2 3,233,400 + DvMF_2558 0.19 -0.8 3,233,444 - DvMF_2558 0.22 -1.7 3,233,574 + DvMF_2558 0.31 -0.3 3,233,579 + DvMF_2558 0.31 -0.2 3,233,905 - DvMF_2558 0.54 -0.3 3,234,079 - DvMF_2558 0.67 -1.6 3,234,090 + DvMF_2558 0.67 -0.9 3,234,330 + DvMF_2558 0.84 -1.0 3,234,416 - -0.2 3,234,552 - +0.4 3,234,775 - -0.7 3,235,216 - DvMF_2559 0.19 -0.5 3,235,266 - DvMF_2559 0.26 -0.4 3,235,325 + DvMF_2559 0.34 +0.1 3,235,325 + DvMF_2559 0.34 -0.3 3,235,333 - DvMF_2559 0.35 +0.1 3,235,333 - DvMF_2559 0.35 -0.4 3,235,346 - DvMF_2559 0.36 +2.1 3,235,451 - DvMF_2559 0.50 -0.2
Or see this region's nucleotide sequence