Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2485 and DvMF_2486 overlap by 10 nucleotides DvMF_2486 and DvMF_2487 overlap by 4 nucleotides DvMF_2487 and DvMF_2488 are separated by 5 nucleotides
DvMF_2485: DvMF_2485 - ABC transporter related (RefSeq), at 3,137,784 to 3,138,614
_2485
DvMF_2486: DvMF_2486 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 3,138,605 to 3,139,561
_2486
DvMF_2487: DvMF_2487 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 3,139,558 to 3,140,505
_2487
DvMF_2488: DvMF_2488 - phosphate binding protein (RefSeq), at 3,140,511 to 3,141,353
_2488
Position (kb)
3139
3140
3141 Strain fitness (log2 ratio)
-1
0
1 at 3138.581 kb on + strand at 3138.738 kb on + strand, within DvMF_2486 at 3138.748 kb on + strand, within DvMF_2486 at 3138.816 kb on + strand, within DvMF_2486 at 3138.819 kb on - strand, within DvMF_2486 at 3138.819 kb on - strand, within DvMF_2486 at 3138.872 kb on - strand, within DvMF_2486 at 3138.878 kb on - strand, within DvMF_2486 at 3138.880 kb on + strand, within DvMF_2486 at 3138.960 kb on - strand, within DvMF_2486 at 3138.971 kb on - strand, within DvMF_2486 at 3139.074 kb on + strand, within DvMF_2486 at 3139.105 kb on + strand, within DvMF_2486 at 3139.244 kb on + strand, within DvMF_2486 at 3139.276 kb on + strand, within DvMF_2486 at 3139.284 kb on - strand, within DvMF_2486 at 3139.367 kb on - strand, within DvMF_2486 at 3139.376 kb on + strand, within DvMF_2486 at 3139.698 kb on - strand, within DvMF_2487 at 3139.725 kb on + strand, within DvMF_2487 at 3139.993 kb on + strand, within DvMF_2487 at 3140.025 kb on + strand, within DvMF_2487 at 3140.025 kb on + strand, within DvMF_2487 at 3140.035 kb on - strand, within DvMF_2487 at 3140.298 kb on - strand, within DvMF_2487 at 3140.340 kb on - strand, within DvMF_2487 at 3140.368 kb on + strand, within DvMF_2487 at 3140.403 kb on - strand, within DvMF_2487 at 3140.487 kb on + strand at 3140.525 kb on - strand at 3140.619 kb on - strand, within DvMF_2488 at 3140.754 kb on - strand, within DvMF_2488 at 3141.231 kb on + strand, within DvMF_2488
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 3,138,581 + -0.3 3,138,738 + DvMF_2486 0.14 -0.4 3,138,748 + DvMF_2486 0.15 -0.3 3,138,816 + DvMF_2486 0.22 +0.6 3,138,819 - DvMF_2486 0.22 -0.3 3,138,819 - DvMF_2486 0.22 -0.3 3,138,872 - DvMF_2486 0.28 -1.7 3,138,878 - DvMF_2486 0.29 -0.1 3,138,880 + DvMF_2486 0.29 +0.1 3,138,960 - DvMF_2486 0.37 -0.5 3,138,971 - DvMF_2486 0.38 -0.1 3,139,074 + DvMF_2486 0.49 -0.5 3,139,105 + DvMF_2486 0.52 -0.3 3,139,244 + DvMF_2486 0.67 -0.7 3,139,276 + DvMF_2486 0.70 -0.8 3,139,284 - DvMF_2486 0.71 -0.5 3,139,367 - DvMF_2486 0.80 +0.4 3,139,376 + DvMF_2486 0.81 -0.2 3,139,698 - DvMF_2487 0.15 -0.7 3,139,725 + DvMF_2487 0.18 -0.6 3,139,993 + DvMF_2487 0.46 -0.5 3,140,025 + DvMF_2487 0.49 -0.8 3,140,025 + DvMF_2487 0.49 -0.5 3,140,035 - DvMF_2487 0.50 -0.3 3,140,298 - DvMF_2487 0.78 -0.8 3,140,340 - DvMF_2487 0.82 -0.5 3,140,368 + DvMF_2487 0.85 -0.2 3,140,403 - DvMF_2487 0.89 -0.6 3,140,487 + -0.3 3,140,525 - -0.3 3,140,619 - DvMF_2488 0.13 -0.2 3,140,754 - DvMF_2488 0.29 -0.5 3,141,231 + DvMF_2488 0.85 -0.6
Or see this region's nucleotide sequence