Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2369 and DvMF_2370 are separated by 116 nucleotides DvMF_2370 and DvMF_2371 overlap by 4 nucleotides
DvMF_2369: DvMF_2369 - TPR repeat-containing protein (RefSeq), at 2,989,135 to 2,989,950
_2369
DvMF_2370: DvMF_2370 - carbamoyl phosphate synthase small subunit (RefSeq), at 2,990,067 to 2,991,197
_2370
DvMF_2371: DvMF_2371 - 3-deoxy-manno-octulosonate cytidylyltransferase (RefSeq), at 2,991,194 to 2,992,006
_2371
Position (kb)
2990
2991
2992 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2989.265 kb on + strand, within DvMF_2369 at 2989.379 kb on - strand, within DvMF_2369 at 2989.446 kb on - strand, within DvMF_2369 at 2989.627 kb on - strand, within DvMF_2369 at 2989.672 kb on - strand, within DvMF_2369 at 2989.672 kb on - strand, within DvMF_2369 at 2989.695 kb on - strand, within DvMF_2369 at 2989.695 kb on - strand, within DvMF_2369 at 2989.700 kb on - strand, within DvMF_2369 at 2989.739 kb on + strand, within DvMF_2369 at 2989.749 kb on + strand, within DvMF_2369 at 2989.862 kb on + strand, within DvMF_2369 at 2989.869 kb on - strand at 2990.095 kb on + strand at 2990.103 kb on - strand at 2990.149 kb on + strand at 2990.250 kb on + strand, within DvMF_2370 at 2990.250 kb on + strand, within DvMF_2370 at 2990.250 kb on + strand, within DvMF_2370 at 2990.590 kb on - strand, within DvMF_2370 at 2990.870 kb on + strand, within DvMF_2370 at 2992.026 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 2,989,265 + DvMF_2369 0.16 -0.2 2,989,379 - DvMF_2369 0.30 -0.7 2,989,446 - DvMF_2369 0.38 -1.0 2,989,627 - DvMF_2369 0.60 -0.6 2,989,672 - DvMF_2369 0.66 -1.1 2,989,672 - DvMF_2369 0.66 -1.7 2,989,695 - DvMF_2369 0.69 -0.2 2,989,695 - DvMF_2369 0.69 -0.7 2,989,700 - DvMF_2369 0.69 -2.3 2,989,739 + DvMF_2369 0.74 -0.9 2,989,749 + DvMF_2369 0.75 +0.4 2,989,862 + DvMF_2369 0.89 -0.6 2,989,869 - -0.7 2,990,095 + -4.6 2,990,103 - -4.5 2,990,149 + -3.1 2,990,250 + DvMF_2370 0.16 -3.3 2,990,250 + DvMF_2370 0.16 -1.5 2,990,250 + DvMF_2370 0.16 -3.1 2,990,590 - DvMF_2370 0.46 -4.1 2,990,870 + DvMF_2370 0.71 -4.3 2,992,026 - -0.4
Or see this region's nucleotide sequence