Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2316 and DvMF_2317 are separated by 42 nucleotides DvMF_2317 and DvMF_2318 overlap by 10 nucleotides DvMF_2318 and DvMF_2319 are separated by 398 nucleotides
DvMF_2316: DvMF_2316 - glutamine amidotransferase class-I (RefSeq), at 2,915,383 to 2,916,225
_2316
DvMF_2317: DvMF_2317 - protein of unknown function DUF152 (RefSeq), at 2,916,268 to 2,917,101
_2317
DvMF_2318: DvMF_2318 - 5-formyltetrahydrofolate cyclo-ligase (RefSeq), at 2,917,092 to 2,917,796
_2318
DvMF_2319: DvMF_2319 - phosphoesterase, Icc protein-like protein (RefSeq), at 2,918,195 to 2,918,872
_2319
Position (kb)
2917
2918 Strain fitness (log2 ratio)
-1
0
1 at 2916.237 kb on - strand at 2916.255 kb on + strand at 2916.360 kb on + strand, within DvMF_2317 at 2916.469 kb on + strand, within DvMF_2317 at 2916.516 kb on + strand, within DvMF_2317 at 2916.522 kb on + strand, within DvMF_2317 at 2916.522 kb on + strand, within DvMF_2317 at 2916.524 kb on - strand, within DvMF_2317 at 2916.530 kb on - strand, within DvMF_2317 at 2916.555 kb on + strand, within DvMF_2317 at 2916.705 kb on + strand, within DvMF_2317 at 2916.793 kb on - strand, within DvMF_2317 at 2916.859 kb on + strand, within DvMF_2317 at 2916.979 kb on - strand, within DvMF_2317 at 2917.098 kb on - strand at 2917.301 kb on + strand, within DvMF_2318 at 2917.375 kb on + strand, within DvMF_2318 at 2917.390 kb on + strand, within DvMF_2318 at 2917.749 kb on + strand at 2918.411 kb on - strand, within DvMF_2319 at 2918.411 kb on - strand, within DvMF_2319 at 2918.483 kb on - strand, within DvMF_2319 at 2918.513 kb on - strand, within DvMF_2319 at 2918.650 kb on + strand, within DvMF_2319 at 2918.722 kb on + strand, within DvMF_2319 at 2918.757 kb on + strand, within DvMF_2319
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 2,916,237 - -0.2 2,916,255 + -0.6 2,916,360 + DvMF_2317 0.11 -0.1 2,916,469 + DvMF_2317 0.24 +0.0 2,916,516 + DvMF_2317 0.30 -0.4 2,916,522 + DvMF_2317 0.30 -0.2 2,916,522 + DvMF_2317 0.30 -0.9 2,916,524 - DvMF_2317 0.31 -0.1 2,916,530 - DvMF_2317 0.31 +0.4 2,916,555 + DvMF_2317 0.34 -0.5 2,916,705 + DvMF_2317 0.52 -0.1 2,916,793 - DvMF_2317 0.63 -0.8 2,916,859 + DvMF_2317 0.71 -0.1 2,916,979 - DvMF_2317 0.85 -0.2 2,917,098 - +1.1 2,917,301 + DvMF_2318 0.30 -1.7 2,917,375 + DvMF_2318 0.40 -1.0 2,917,390 + DvMF_2318 0.42 -0.6 2,917,749 + -0.5 2,918,411 - DvMF_2319 0.32 -0.5 2,918,411 - DvMF_2319 0.32 -0.4 2,918,483 - DvMF_2319 0.42 -0.2 2,918,513 - DvMF_2319 0.47 -0.8 2,918,650 + DvMF_2319 0.67 -0.8 2,918,722 + DvMF_2319 0.78 -0.3 2,918,757 + DvMF_2319 0.83 -0.7
Or see this region's nucleotide sequence