Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2308 and DvMF_2309 are separated by 75 nucleotides DvMF_2309 and DvMF_2310 are separated by 186 nucleotides DvMF_2310 and DvMF_2311 are separated by 364 nucleotides
DvMF_2308: DvMF_2308 - KpsF/GutQ family protein (RefSeq), at 2,901,848 to 2,902,849
_2308
DvMF_2309: DvMF_2309 - thioesterase superfamily protein (RefSeq), at 2,902,925 to 2,903,452
_2309
DvMF_2310: DvMF_2310 - hypothetical protein (RefSeq), at 2,903,639 to 2,904,985
_2310
DvMF_2311: DvMF_2311 - hypothetical protein (RefSeq), at 2,905,350 to 2,909,594
_2311
Position (kb)
2903
2904
2905 Strain fitness (log2 ratio)
-1
0
1 at 2903.155 kb on - strand, within DvMF_2309 at 2903.156 kb on + strand, within DvMF_2309 at 2903.720 kb on - strand at 2904.009 kb on - strand, within DvMF_2310 at 2904.251 kb on + strand, within DvMF_2310 at 2904.251 kb on + strand, within DvMF_2310 at 2904.274 kb on + strand, within DvMF_2310 at 2904.432 kb on + strand, within DvMF_2310 at 2904.572 kb on + strand, within DvMF_2310 at 2905.134 kb on - strand at 2905.148 kb on - strand at 2905.426 kb on - strand at 2905.508 kb on - strand at 2905.646 kb on + strand at 2905.691 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 2,903,155 - DvMF_2309 0.44 -0.4 2,903,156 + DvMF_2309 0.44 +0.2 2,903,720 - -0.5 2,904,009 - DvMF_2310 0.27 -0.2 2,904,251 + DvMF_2310 0.45 -0.7 2,904,251 + DvMF_2310 0.45 +0.4 2,904,274 + DvMF_2310 0.47 -0.2 2,904,432 + DvMF_2310 0.59 +0.0 2,904,572 + DvMF_2310 0.69 -0.4 2,905,134 - -0.4 2,905,148 - -0.1 2,905,426 - -0.3 2,905,508 - -0.7 2,905,646 + -0.1 2,905,691 - +0.5
Or see this region's nucleotide sequence