Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2285 and DvMF_2286 are separated by 19 nucleotides DvMF_2286 and DvMF_2287 are separated by 316 nucleotides DvMF_2287 and DvMF_2288 overlap by 32 nucleotides DvMF_2288 and DvMF_2289 overlap by 14 nucleotides
DvMF_2285: DvMF_2285 - flagellar basal-body rod protein FlgC (RefSeq), at 2,873,445 to 2,873,882
_2285
DvMF_2286: DvMF_2286 - flagellar hook-basal body complex subunit FliE (RefSeq), at 2,873,902 to 2,874,234
_2286
DvMF_2287: DvMF_2287 - flagellar M-ring protein FliF (RefSeq), at 2,874,551 to 2,876,170
_2287
DvMF_2288: DvMF_2288 - flagellar motor switch protein FliG (RefSeq), at 2,876,139 to 2,877,155
_2288
DvMF_2289: DvMF_2289 - flagellar assembly protein FliH, putative (RefSeq), at 2,877,142 to 2,877,906
_2289
Position (kb)
2874
2875
2876
2877 Strain fitness (log2 ratio)
-1
0
1
2 at 2873.566 kb on - strand, within DvMF_2285 at 2873.566 kb on - strand, within DvMF_2285 at 2873.817 kb on - strand, within DvMF_2285 at 2874.020 kb on - strand, within DvMF_2286 at 2874.219 kb on - strand at 2874.503 kb on + strand at 2874.506 kb on - strand at 2874.508 kb on + strand at 2874.583 kb on + strand at 2874.643 kb on - strand at 2874.837 kb on + strand, within DvMF_2287 at 2874.877 kb on - strand, within DvMF_2287 at 2874.909 kb on - strand, within DvMF_2287 at 2874.909 kb on - strand, within DvMF_2287 at 2875.111 kb on - strand, within DvMF_2287 at 2875.170 kb on + strand, within DvMF_2287 at 2875.194 kb on + strand, within DvMF_2287 at 2875.206 kb on - strand, within DvMF_2287 at 2875.295 kb on - strand, within DvMF_2287 at 2875.362 kb on + strand, within DvMF_2287 at 2875.438 kb on - strand, within DvMF_2287 at 2875.673 kb on + strand, within DvMF_2287 at 2875.729 kb on + strand, within DvMF_2287 at 2875.815 kb on + strand, within DvMF_2287 at 2875.843 kb on - strand, within DvMF_2287 at 2875.870 kb on + strand, within DvMF_2287 at 2875.914 kb on + strand, within DvMF_2287 at 2875.936 kb on - strand, within DvMF_2287 at 2876.047 kb on + strand at 2876.062 kb on + strand at 2876.124 kb on + strand at 2876.441 kb on - strand, within DvMF_2288 at 2876.586 kb on + strand, within DvMF_2288 at 2876.622 kb on - strand, within DvMF_2288 at 2876.914 kb on - strand, within DvMF_2288 at 2876.935 kb on + strand, within DvMF_2288 at 2876.956 kb on + strand, within DvMF_2288 at 2876.977 kb on - strand, within DvMF_2288
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 2,873,566 - DvMF_2285 0.28 +1.3 2,873,566 - DvMF_2285 0.28 +1.5 2,873,817 - DvMF_2285 0.85 +1.2 2,874,020 - DvMF_2286 0.35 +1.1 2,874,219 - +1.0 2,874,503 + -0.4 2,874,506 - -0.6 2,874,508 + -0.7 2,874,583 + +0.7 2,874,643 - +0.3 2,874,837 + DvMF_2287 0.18 +1.2 2,874,877 - DvMF_2287 0.20 +1.2 2,874,909 - DvMF_2287 0.22 +1.0 2,874,909 - DvMF_2287 0.22 +1.1 2,875,111 - DvMF_2287 0.35 +0.9 2,875,170 + DvMF_2287 0.38 +1.4 2,875,194 + DvMF_2287 0.40 +0.8 2,875,206 - DvMF_2287 0.40 +1.3 2,875,295 - DvMF_2287 0.46 +2.1 2,875,362 + DvMF_2287 0.50 +1.0 2,875,438 - DvMF_2287 0.55 +1.9 2,875,673 + DvMF_2287 0.69 +1.3 2,875,729 + DvMF_2287 0.73 +0.9 2,875,815 + DvMF_2287 0.78 +1.2 2,875,843 - DvMF_2287 0.80 +1.1 2,875,870 + DvMF_2287 0.81 +1.2 2,875,914 + DvMF_2287 0.84 +1.1 2,875,936 - DvMF_2287 0.85 +1.1 2,876,047 + +1.7 2,876,062 + +1.1 2,876,124 + -0.5 2,876,441 - DvMF_2288 0.30 +1.0 2,876,586 + DvMF_2288 0.44 +1.1 2,876,622 - DvMF_2288 0.47 +0.8 2,876,914 - DvMF_2288 0.76 +1.4 2,876,935 + DvMF_2288 0.78 +0.9 2,876,956 + DvMF_2288 0.80 +0.8 2,876,977 - DvMF_2288 0.82 +1.3
Or see this region's nucleotide sequence