Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2283 and flgB are separated by 659 nucleotides flgB and DvMF_2285 overlap by 1 nucleotides DvMF_2285 and DvMF_2286 are separated by 19 nucleotides
DvMF_2283: DvMF_2283 - TPR repeat-containing protein (RefSeq), at 2,871,815 to 2,872,375
_2283
DvMF_2284: flgB - flagellar basal body rod protein FlgB (RefSeq), at 2,873,035 to 2,873,445
flgB
DvMF_2285: DvMF_2285 - flagellar basal-body rod protein FlgC (RefSeq), at 2,873,445 to 2,873,882
_2285
DvMF_2286: DvMF_2286 - flagellar hook-basal body complex subunit FliE (RefSeq), at 2,873,902 to 2,874,234
_2286
Position (kb)
2873
2874 Strain fitness (log2 ratio)
-1
0
1 at 2872.200 kb on + strand, within DvMF_2283 at 2872.406 kb on + strand at 2872.495 kb on - strand at 2872.495 kb on - strand at 2872.559 kb on + strand at 2872.695 kb on + strand at 2872.709 kb on + strand at 2873.064 kb on - strand at 2873.236 kb on + strand, within flgB at 2873.403 kb on + strand, within flgB at 2873.566 kb on - strand, within DvMF_2285 at 2873.566 kb on - strand, within DvMF_2285 at 2873.817 kb on - strand, within DvMF_2285 at 2874.020 kb on - strand, within DvMF_2286 at 2874.219 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 2,872,200 + DvMF_2283 0.69 -0.1 2,872,406 + -0.5 2,872,495 - -0.3 2,872,495 - +1.0 2,872,559 + -0.4 2,872,695 + -0.3 2,872,709 + -0.4 2,873,064 - +1.1 2,873,236 + flgB DvMF_2284 0.49 +1.3 2,873,403 + flgB DvMF_2284 0.90 +1.3 2,873,566 - DvMF_2285 0.28 +1.3 2,873,566 - DvMF_2285 0.28 +1.5 2,873,817 - DvMF_2285 0.85 +1.2 2,874,020 - DvMF_2286 0.35 +1.1 2,874,219 - +1.0
Or see this region's nucleotide sequence