Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2248 and DvMF_2249 are separated by 402 nucleotides DvMF_2249 and DvMF_2250 are separated by 384 nucleotides
DvMF_2248: DvMF_2248 - signal recognition particle-docking protein FtsY (RefSeq), at 2,822,247 to 2,823,641
_2248
DvMF_2249: DvMF_2249 - signal transduction histidine kinase, nitrogen specific, NtrB (RefSeq), at 2,824,044 to 2,826,359
_2249
DvMF_2250: DvMF_2250 - membrane protein involved in aromatic hydrocarbon degradation (RefSeq), at 2,826,744 to 2,827,967
_2250
Position (kb)
2824
2825
2826
2827 Strain fitness (log2 ratio)
-1
0
1 at 2824.047 kb on + strand at 2824.288 kb on + strand, within DvMF_2249 at 2824.361 kb on - strand, within DvMF_2249 at 2824.365 kb on + strand, within DvMF_2249 at 2824.366 kb on - strand, within DvMF_2249 at 2824.462 kb on - strand, within DvMF_2249 at 2824.985 kb on + strand, within DvMF_2249 at 2825.269 kb on + strand, within DvMF_2249 at 2825.428 kb on - strand, within DvMF_2249 at 2825.545 kb on - strand, within DvMF_2249 at 2825.680 kb on - strand, within DvMF_2249 at 2826.225 kb on + strand at 2826.362 kb on - strand at 2826.490 kb on + strand at 2826.516 kb on + strand at 2826.528 kb on + strand at 2826.604 kb on + strand at 2826.839 kb on + strand at 2827.047 kb on - strand, within DvMF_2250 at 2827.047 kb on - strand, within DvMF_2250 at 2827.072 kb on - strand, within DvMF_2250 at 2827.174 kb on + strand, within DvMF_2250
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 2,824,047 + +0.8 2,824,288 + DvMF_2249 0.11 +1.4 2,824,361 - DvMF_2249 0.14 +1.0 2,824,365 + DvMF_2249 0.14 +1.0 2,824,366 - DvMF_2249 0.14 +1.0 2,824,462 - DvMF_2249 0.18 +0.9 2,824,985 + DvMF_2249 0.41 +1.3 2,825,269 + DvMF_2249 0.53 +1.3 2,825,428 - DvMF_2249 0.60 +0.8 2,825,545 - DvMF_2249 0.65 +1.0 2,825,680 - DvMF_2249 0.71 +0.3 2,826,225 + +1.1 2,826,362 - -0.0 2,826,490 + -0.6 2,826,516 + -1.0 2,826,528 + -0.1 2,826,604 + -0.3 2,826,839 + -0.4 2,827,047 - DvMF_2250 0.25 -0.6 2,827,047 - DvMF_2250 0.25 -0.3 2,827,072 - DvMF_2250 0.27 -0.3 2,827,174 + DvMF_2250 0.35 -0.3
Or see this region's nucleotide sequence