Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2225 and DvMF_2226 are separated by 655 nucleotides DvMF_2226 and DvMF_2227 are separated by 448 nucleotides DvMF_2227 and DvMF_2228 are separated by 61 nucleotides
DvMF_2225: DvMF_2225 - hypothetical protein (RefSeq), at 2,786,930 to 2,787,349
_2225
DvMF_2226: DvMF_2226 - type IV pilus assembly PilZ (RefSeq), at 2,788,005 to 2,788,403
_2226
DvMF_2227: DvMF_2227 - Dinitrogenase iron-molybdenum cofactor biosynthesis protein (RefSeq), at 2,788,852 to 2,789,220
_2227
DvMF_2228: DvMF_2228 - SEC-C motif domain protein (RefSeq), at 2,789,282 to 2,789,779
_2228
Position (kb)
2788
2789 Strain fitness (log2 ratio)
-1
0
1
2 at 2787.260 kb on - strand, within DvMF_2225 at 2787.626 kb on - strand at 2787.930 kb on + strand at 2788.194 kb on - strand, within DvMF_2226 at 2788.244 kb on + strand, within DvMF_2226 at 2788.353 kb on + strand, within DvMF_2226 at 2788.813 kb on - strand at 2788.914 kb on + strand, within DvMF_2227 at 2788.922 kb on - strand, within DvMF_2227 at 2789.055 kb on + strand, within DvMF_2227 at 2789.101 kb on - strand, within DvMF_2227 at 2789.324 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 2,787,260 - DvMF_2225 0.79 -1.1 2,787,626 - -0.7 2,787,930 + -0.1 2,788,194 - DvMF_2226 0.47 +2.0 2,788,244 + DvMF_2226 0.60 -0.1 2,788,353 + DvMF_2226 0.87 -0.1 2,788,813 - -0.1 2,788,914 + DvMF_2227 0.17 +0.3 2,788,922 - DvMF_2227 0.19 -0.6 2,789,055 + DvMF_2227 0.55 -1.6 2,789,101 - DvMF_2227 0.67 +0.3 2,789,324 - -0.2
Or see this region's nucleotide sequence