Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2142 and DvMF_2143 are separated by 59 nucleotides DvMF_2143 and DvMF_2144 are separated by 94 nucleotides DvMF_2144 and DvMF_2145 overlap by 4 nucleotides
DvMF_2142: DvMF_2142 - dihydroorotate oxidase B, electron transfer subunit (RefSeq), at 2,668,098 to 2,668,967
_2142
DvMF_2143: DvMF_2143 - dihydroorotate dehydrogenase family protein (RefSeq), at 2,669,027 to 2,669,953
_2143
DvMF_2144: DvMF_2144 - GCN5-related N-acetyltransferase (RefSeq), at 2,670,048 to 2,670,587
_2144
DvMF_2145: DvMF_2145 - Protein of unknown function DUF1778 (RefSeq), at 2,670,584 to 2,670,856
_2145
Position (kb)
2669
2670 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2668.085 kb on + strand at 2668.469 kb on + strand, within DvMF_2142 at 2668.477 kb on + strand, within DvMF_2142 at 2668.582 kb on - strand, within DvMF_2142 at 2669.167 kb on + strand, within DvMF_2143 at 2669.197 kb on + strand, within DvMF_2143 at 2669.197 kb on + strand, within DvMF_2143 at 2669.485 kb on + strand, within DvMF_2143 at 2669.657 kb on - strand, within DvMF_2143 at 2669.665 kb on + strand, within DvMF_2143 at 2669.929 kb on + strand at 2670.045 kb on + strand at 2670.045 kb on + strand at 2670.053 kb on - strand at 2670.053 kb on - strand at 2670.281 kb on + strand, within DvMF_2144 at 2670.416 kb on - strand, within DvMF_2144 at 2670.755 kb on + strand, within DvMF_2145
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 2,668,085 + -0.4 2,668,469 + DvMF_2142 0.43 -2.4 2,668,477 + DvMF_2142 0.44 -2.4 2,668,582 - DvMF_2142 0.56 -4.3 2,669,167 + DvMF_2143 0.15 -2.7 2,669,197 + DvMF_2143 0.18 -3.6 2,669,197 + DvMF_2143 0.18 -2.7 2,669,485 + DvMF_2143 0.49 -3.5 2,669,657 - DvMF_2143 0.68 -4.1 2,669,665 + DvMF_2143 0.69 -0.9 2,669,929 + -0.2 2,670,045 + -0.6 2,670,045 + -0.4 2,670,053 - -0.7 2,670,053 - -0.7 2,670,281 + DvMF_2144 0.43 -0.9 2,670,416 - DvMF_2144 0.68 -0.2 2,670,755 + DvMF_2145 0.63 +0.2
Or see this region's nucleotide sequence