Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2135 and DvMF_2136 overlap by 4 nucleotides DvMF_2136 and DvMF_2137 are separated by 1 nucleotides DvMF_2137 and DvMF_2138 are separated by 54 nucleotides
DvMF_2135: DvMF_2135 - TRAP dicarboxylate transporter, DctP subunit (RefSeq), at 2,659,395 to 2,660,492
_2135
DvMF_2136: DvMF_2136 - Tripartite ATP-independent periplasmic transporter DctQ component (RefSeq), at 2,660,489 to 2,661,226
_2136
DvMF_2137: DvMF_2137 - TRAP dicarboxylate transporter, DctM subunit (RefSeq), at 2,661,228 to 2,662,511
_2137
DvMF_2138: DvMF_2138 - transcriptional regulator, LysR family (RefSeq), at 2,662,566 to 2,663,579
_2138
Position (kb)
2661
2662
2663 Strain fitness (log2 ratio)
-1
0
1
2 at 2660.267 kb on - strand, within DvMF_2135 at 2660.617 kb on - strand, within DvMF_2136 at 2660.717 kb on - strand, within DvMF_2136 at 2660.938 kb on + strand, within DvMF_2136 at 2661.010 kb on - strand, within DvMF_2136 at 2661.333 kb on + strand at 2661.338 kb on + strand at 2661.362 kb on + strand, within DvMF_2137 at 2661.433 kb on - strand, within DvMF_2137 at 2661.551 kb on - strand, within DvMF_2137 at 2661.713 kb on - strand, within DvMF_2137 at 2661.913 kb on + strand, within DvMF_2137 at 2662.588 kb on + strand at 2662.714 kb on + strand, within DvMF_2138 at 2663.388 kb on - strand, within DvMF_2138 at 2663.409 kb on + strand, within DvMF_2138 at 2663.417 kb on - strand, within DvMF_2138
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 2,660,267 - DvMF_2135 0.79 +0.2 2,660,617 - DvMF_2136 0.17 +0.4 2,660,717 - DvMF_2136 0.31 -0.1 2,660,938 + DvMF_2136 0.61 +0.1 2,661,010 - DvMF_2136 0.71 -0.1 2,661,333 + -0.4 2,661,338 + -0.3 2,661,362 + DvMF_2137 0.10 -0.2 2,661,433 - DvMF_2137 0.16 +1.0 2,661,551 - DvMF_2137 0.25 +1.8 2,661,713 - DvMF_2137 0.38 -0.5 2,661,913 + DvMF_2137 0.53 -0.3 2,662,588 + -0.2 2,662,714 + DvMF_2138 0.15 +0.4 2,663,388 - DvMF_2138 0.81 -0.5 2,663,409 + DvMF_2138 0.83 -0.6 2,663,417 - DvMF_2138 0.84 -0.4
Or see this region's nucleotide sequence