Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2107 and DvMF_2108 overlap by 13 nucleotides DvMF_2108 and DvMF_2109 overlap by 4 nucleotides
DvMF_2107: DvMF_2107 - response regulator receiver protein (RefSeq), at 2,624,260 to 2,626,566
_2107
DvMF_2108: DvMF_2108 - integral membrane sensor signal transduction histidine kinase (RefSeq), at 2,626,554 to 2,628,242
_2108
DvMF_2109: DvMF_2109 - two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq), at 2,628,239 to 2,629,786
_2109
Position (kb)
2626
2627
2628
2629 Strain fitness (log2 ratio)
-1
0
1
2 at 2625.907 kb on + strand, within DvMF_2107 at 2625.950 kb on + strand, within DvMF_2107 at 2626.096 kb on - strand, within DvMF_2107 at 2626.249 kb on - strand, within DvMF_2107 at 2626.669 kb on - strand at 2626.685 kb on + strand at 2626.763 kb on + strand, within DvMF_2108 at 2626.862 kb on + strand, within DvMF_2108 at 2626.864 kb on + strand, within DvMF_2108 at 2627.065 kb on + strand, within DvMF_2108 at 2627.214 kb on + strand, within DvMF_2108 at 2627.214 kb on + strand, within DvMF_2108 at 2627.224 kb on + strand, within DvMF_2108 at 2627.444 kb on - strand, within DvMF_2108 at 2627.503 kb on + strand, within DvMF_2108 at 2627.597 kb on - strand, within DvMF_2108 at 2627.654 kb on - strand, within DvMF_2108 at 2627.762 kb on + strand, within DvMF_2108 at 2627.966 kb on + strand, within DvMF_2108 at 2628.037 kb on + strand, within DvMF_2108 at 2628.316 kb on - strand at 2628.511 kb on + strand, within DvMF_2109 at 2629.104 kb on - strand, within DvMF_2109 at 2629.174 kb on - strand, within DvMF_2109 at 2629.240 kb on + strand, within DvMF_2109
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 2,625,907 + DvMF_2107 0.71 -0.3 2,625,950 + DvMF_2107 0.73 -0.3 2,626,096 - DvMF_2107 0.80 -0.4 2,626,249 - DvMF_2107 0.86 -0.1 2,626,669 - -0.9 2,626,685 + +0.2 2,626,763 + DvMF_2108 0.12 -0.2 2,626,862 + DvMF_2108 0.18 -0.6 2,626,864 + DvMF_2108 0.18 -0.6 2,627,065 + DvMF_2108 0.30 +2.3 2,627,214 + DvMF_2108 0.39 -0.4 2,627,214 + DvMF_2108 0.39 +0.0 2,627,224 + DvMF_2108 0.40 -0.1 2,627,444 - DvMF_2108 0.53 -0.5 2,627,503 + DvMF_2108 0.56 -0.3 2,627,597 - DvMF_2108 0.62 -0.2 2,627,654 - DvMF_2108 0.65 -0.3 2,627,762 + DvMF_2108 0.72 -0.1 2,627,966 + DvMF_2108 0.84 -0.1 2,628,037 + DvMF_2108 0.88 -0.3 2,628,316 - +0.4 2,628,511 + DvMF_2109 0.18 -0.6 2,629,104 - DvMF_2109 0.56 -0.1 2,629,174 - DvMF_2109 0.60 -0.2 2,629,240 + DvMF_2109 0.65 -0.4
Or see this region's nucleotide sequence