Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1934 and DvMF_1935 are separated by 413 nucleotides DvMF_1935 and DvMF_1936 are separated by 180 nucleotides
DvMF_1934: DvMF_1934 - sulfoacetaldehyde acetyltransferase (RefSeq), at 2,386,190 to 2,387,932
_1934
DvMF_1935: DvMF_1935 - hypothetical protein (RefSeq), at 2,388,346 to 2,388,756
_1935
DvMF_1936: DvMF_1936 - Deoxyribodipyrimidine photo-lyase (RefSeq), at 2,388,937 to 2,390,421
_1936
Position (kb)
2388
2389 Strain fitness (log2 ratio)
-1
0
1
2 at 2387.583 kb on - strand, within DvMF_1934 at 2387.593 kb on + strand, within DvMF_1934 at 2387.601 kb on - strand, within DvMF_1934 at 2387.711 kb on + strand, within DvMF_1934 at 2388.140 kb on + strand at 2388.318 kb on + strand at 2388.505 kb on + strand, within DvMF_1935 at 2388.550 kb on + strand, within DvMF_1935 at 2388.628 kb on + strand, within DvMF_1935 at 2388.714 kb on + strand, within DvMF_1935 at 2388.746 kb on - strand at 2388.759 kb on - strand at 2388.759 kb on - strand at 2388.935 kb on + strand at 2388.938 kb on - strand at 2388.943 kb on - strand at 2388.943 kb on - strand at 2388.943 kb on - strand at 2388.943 kb on - strand at 2388.943 kb on - strand at 2389.164 kb on - strand, within DvMF_1936 at 2389.183 kb on + strand, within DvMF_1936 at 2389.362 kb on + strand, within DvMF_1936 at 2389.380 kb on - strand, within DvMF_1936 at 2389.652 kb on - strand, within DvMF_1936
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 2,387,583 - DvMF_1934 0.80 -0.9 2,387,593 + DvMF_1934 0.80 -0.1 2,387,601 - DvMF_1934 0.81 -0.8 2,387,711 + DvMF_1934 0.87 +0.1 2,388,140 + +0.1 2,388,318 + -0.4 2,388,505 + DvMF_1935 0.39 +1.8 2,388,550 + DvMF_1935 0.50 -0.5 2,388,628 + DvMF_1935 0.69 +0.3 2,388,714 + DvMF_1935 0.90 -0.2 2,388,746 - -0.3 2,388,759 - -0.4 2,388,759 - -0.2 2,388,935 + -0.2 2,388,938 - -0.2 2,388,943 - -0.8 2,388,943 - -0.0 2,388,943 - +0.1 2,388,943 - -0.0 2,388,943 - -0.7 2,389,164 - DvMF_1936 0.15 -0.2 2,389,183 + DvMF_1936 0.17 -0.7 2,389,362 + DvMF_1936 0.29 -0.6 2,389,380 - DvMF_1936 0.30 -0.3 2,389,652 - DvMF_1936 0.48 -0.4
Or see this region's nucleotide sequence