Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1855 and DvMF_1856 are separated by 56 nucleotides DvMF_1856 and DvMF_1857 are separated by 303 nucleotides DvMF_1857 and DvMF_1858 are separated by 576 nucleotides
DvMF_1855: DvMF_1855 - glycosyltransferase-like protein (RefSeq), at 2,269,362 to 2,270,138
_1855
DvMF_1856: DvMF_1856 - hypothetical protein (RefSeq), at 2,270,195 to 2,270,572
_1856
DvMF_1857: DvMF_1857 - hypothetical protein (RefSeq), at 2,270,876 to 2,271,508
_1857
DvMF_1858: DvMF_1858 - multi-sensor hybrid histidine kinase (RefSeq), at 2,272,085 to 2,275,660
_1858
Position (kb)
2270
2271
2272 Strain fitness (log2 ratio)
-1
0
1 at 2269.879 kb on + strand, within DvMF_1855 at 2269.887 kb on - strand, within DvMF_1855 at 2270.019 kb on - strand, within DvMF_1855 at 2270.065 kb on - strand at 2270.065 kb on - strand at 2270.065 kb on - strand at 2270.065 kb on - strand at 2270.192 kb on + strand at 2270.712 kb on + strand at 2270.712 kb on + strand at 2270.836 kb on + strand at 2270.861 kb on - strand at 2270.904 kb on + strand at 2270.939 kb on - strand at 2271.271 kb on - strand, within DvMF_1857 at 2271.392 kb on + strand, within DvMF_1857 at 2271.392 kb on + strand, within DvMF_1857 at 2271.392 kb on + strand, within DvMF_1857 at 2271.488 kb on - strand at 2271.594 kb on + strand at 2271.594 kb on + strand at 2271.594 kb on + strand at 2271.594 kb on + strand at 2271.594 kb on + strand at 2271.594 kb on + strand at 2271.602 kb on - strand at 2271.602 kb on - strand at 2271.602 kb on - strand at 2271.602 kb on - strand at 2271.602 kb on - strand at 2271.642 kb on - strand at 2271.684 kb on - strand at 2271.686 kb on + strand at 2271.913 kb on - strand at 2272.042 kb on - strand at 2272.345 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 2,269,879 + DvMF_1855 0.67 -0.2 2,269,887 - DvMF_1855 0.68 -0.3 2,270,019 - DvMF_1855 0.85 -0.3 2,270,065 - -0.1 2,270,065 - -0.1 2,270,065 - -0.3 2,270,065 - +0.6 2,270,192 + -0.1 2,270,712 + -0.3 2,270,712 + -0.5 2,270,836 + +0.4 2,270,861 - -0.1 2,270,904 + -1.1 2,270,939 - -1.1 2,271,271 - DvMF_1857 0.62 -0.4 2,271,392 + DvMF_1857 0.82 -0.8 2,271,392 + DvMF_1857 0.82 -0.8 2,271,392 + DvMF_1857 0.82 -1.3 2,271,488 - -0.1 2,271,594 + -0.1 2,271,594 + -0.2 2,271,594 + -0.7 2,271,594 + -0.2 2,271,594 + +0.0 2,271,594 + -0.2 2,271,602 - -0.6 2,271,602 - -0.3 2,271,602 - -0.3 2,271,602 - -0.5 2,271,602 - -0.6 2,271,642 - +0.1 2,271,684 - +0.2 2,271,686 + -0.6 2,271,913 - +0.3 2,272,042 - -0.1 2,272,345 - -0.6
Or see this region's nucleotide sequence