Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1848 and DvMF_1849 overlap by 4 nucleotides DvMF_1849 and DvMF_1850 are separated by 15 nucleotides
DvMF_1848: DvMF_1848 - hypothetical protein (RefSeq), at 2,259,906 to 2,261,060
_1848
DvMF_1849: DvMF_1849 - Radical SAM domain protein (RefSeq), at 2,261,057 to 2,261,989
_1849
DvMF_1850: DvMF_1850 - Capsule polysaccharide biosynthesis protein (RefSeq), at 2,262,005 to 2,263,510
_1850
Position (kb)
2261
2262 Strain fitness (log2 ratio)
-2
-1
0
1 at 2260.152 kb on + strand, within DvMF_1848 at 2260.256 kb on + strand, within DvMF_1848 at 2260.438 kb on - strand, within DvMF_1848 at 2260.593 kb on + strand, within DvMF_1848 at 2260.593 kb on + strand, within DvMF_1848 at 2260.616 kb on + strand, within DvMF_1848 at 2260.679 kb on - strand, within DvMF_1848 at 2260.681 kb on + strand, within DvMF_1848 at 2260.681 kb on + strand, within DvMF_1848 at 2260.703 kb on + strand, within DvMF_1848 at 2260.704 kb on - strand, within DvMF_1848 at 2260.890 kb on - strand, within DvMF_1848 at 2261.363 kb on + strand, within DvMF_1849 at 2261.363 kb on - strand, within DvMF_1849 at 2261.806 kb on + strand, within DvMF_1849 at 2261.927 kb on + strand at 2261.964 kb on + strand at 2261.972 kb on - strand at 2261.972 kb on - strand at 2262.085 kb on + strand at 2262.095 kb on + strand at 2262.103 kb on - strand at 2262.555 kb on + strand, within DvMF_1850 at 2262.661 kb on - strand, within DvMF_1850 at 2262.949 kb on - strand, within DvMF_1850
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 2,260,152 + DvMF_1848 0.21 -1.0 2,260,256 + DvMF_1848 0.30 -1.2 2,260,438 - DvMF_1848 0.46 -0.9 2,260,593 + DvMF_1848 0.59 -1.1 2,260,593 + DvMF_1848 0.59 -0.7 2,260,616 + DvMF_1848 0.61 -0.5 2,260,679 - DvMF_1848 0.67 -0.7 2,260,681 + DvMF_1848 0.67 -1.3 2,260,681 + DvMF_1848 0.67 -1.1 2,260,703 + DvMF_1848 0.69 -0.8 2,260,704 - DvMF_1848 0.69 -0.6 2,260,890 - DvMF_1848 0.85 -0.8 2,261,363 + DvMF_1849 0.33 -0.9 2,261,363 - DvMF_1849 0.33 -0.8 2,261,806 + DvMF_1849 0.80 -0.9 2,261,927 + -0.5 2,261,964 + -1.1 2,261,972 - -1.3 2,261,972 - -1.4 2,262,085 + -0.8 2,262,095 + -0.5 2,262,103 - -1.2 2,262,555 + DvMF_1850 0.37 -1.9 2,262,661 - DvMF_1850 0.44 +1.6 2,262,949 - DvMF_1850 0.63 -0.9
Or see this region's nucleotide sequence