Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1845 and DvMF_1846 overlap by 8 nucleotides DvMF_1846 and DvMF_1847 overlap by 8 nucleotides DvMF_1847 and DvMF_1848 are separated by 8 nucleotides
DvMF_1845: DvMF_1845 - N-acylneuraminate-9-phosphate synthase (RefSeq), at 2,256,710 to 2,257,744
_1845
DvMF_1846: DvMF_1846 - UDP-N-acetylglucosamine 2-epimerase (RefSeq), at 2,257,737 to 2,258,963
_1846
DvMF_1847: DvMF_1847 - polysaccharide deacetylase (RefSeq), at 2,258,956 to 2,259,897
_1847
DvMF_1848: DvMF_1848 - hypothetical protein (RefSeq), at 2,259,906 to 2,261,060
_1848
Position (kb)
2257
2258
2259 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2256.822 kb on - strand, within DvMF_1845 at 2256.953 kb on + strand, within DvMF_1845 at 2256.998 kb on + strand, within DvMF_1845 at 2257.050 kb on + strand, within DvMF_1845 at 2257.068 kb on - strand, within DvMF_1845 at 2257.190 kb on + strand, within DvMF_1845 at 2257.229 kb on + strand, within DvMF_1845 at 2257.463 kb on - strand, within DvMF_1845 at 2257.510 kb on - strand, within DvMF_1845 at 2257.510 kb on - strand, within DvMF_1845 at 2257.556 kb on + strand, within DvMF_1845 at 2257.598 kb on - strand, within DvMF_1845 at 2257.601 kb on + strand, within DvMF_1845 at 2257.601 kb on + strand, within DvMF_1845 at 2257.609 kb on - strand, within DvMF_1845 at 2257.790 kb on + strand at 2258.110 kb on + strand, within DvMF_1846 at 2258.252 kb on - strand, within DvMF_1846 at 2258.367 kb on - strand, within DvMF_1846 at 2258.375 kb on + strand, within DvMF_1846 at 2258.390 kb on + strand, within DvMF_1846 at 2258.429 kb on + strand, within DvMF_1846 at 2258.434 kb on + strand, within DvMF_1846 at 2258.437 kb on - strand, within DvMF_1846 at 2258.459 kb on - strand, within DvMF_1846 at 2258.575 kb on + strand, within DvMF_1846 at 2258.630 kb on - strand, within DvMF_1846 at 2258.817 kb on - strand, within DvMF_1846 at 2258.891 kb on + strand at 2259.039 kb on - strand at 2259.046 kb on - strand at 2259.345 kb on + strand, within DvMF_1847 at 2259.348 kb on - strand, within DvMF_1847 at 2259.628 kb on - strand, within DvMF_1847 at 2259.714 kb on + strand, within DvMF_1847 at 2259.757 kb on + strand, within DvMF_1847 at 2259.803 kb on + strand at 2259.911 kb on + strand at 2259.947 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 2,256,822 - DvMF_1845 0.11 -1.0 2,256,953 + DvMF_1845 0.23 -1.1 2,256,998 + DvMF_1845 0.28 +0.1 2,257,050 + DvMF_1845 0.33 -1.1 2,257,068 - DvMF_1845 0.35 -0.9 2,257,190 + DvMF_1845 0.46 -0.9 2,257,229 + DvMF_1845 0.50 -3.1 2,257,463 - DvMF_1845 0.73 -0.8 2,257,510 - DvMF_1845 0.77 -1.3 2,257,510 - DvMF_1845 0.77 -0.6 2,257,556 + DvMF_1845 0.82 -0.5 2,257,598 - DvMF_1845 0.86 -1.0 2,257,601 + DvMF_1845 0.86 -0.9 2,257,601 + DvMF_1845 0.86 -0.9 2,257,609 - DvMF_1845 0.87 -0.5 2,257,790 + -1.1 2,258,110 + DvMF_1846 0.30 -0.1 2,258,252 - DvMF_1846 0.42 -1.3 2,258,367 - DvMF_1846 0.51 -0.6 2,258,375 + DvMF_1846 0.52 -0.4 2,258,390 + DvMF_1846 0.53 -0.7 2,258,429 + DvMF_1846 0.56 -0.6 2,258,434 + DvMF_1846 0.57 -0.6 2,258,437 - DvMF_1846 0.57 -0.2 2,258,459 - DvMF_1846 0.59 -1.0 2,258,575 + DvMF_1846 0.68 -0.9 2,258,630 - DvMF_1846 0.73 -1.3 2,258,817 - DvMF_1846 0.88 -0.9 2,258,891 + -0.7 2,259,039 - -0.8 2,259,046 - -1.3 2,259,345 + DvMF_1847 0.41 -1.1 2,259,348 - DvMF_1847 0.42 -0.9 2,259,628 - DvMF_1847 0.71 -0.9 2,259,714 + DvMF_1847 0.80 -0.6 2,259,757 + DvMF_1847 0.85 -1.7 2,259,803 + -0.6 2,259,911 + -0.5 2,259,947 - -0.4
Or see this region's nucleotide sequence