Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1807 and DvMF_1808 are separated by 93 nucleotides DvMF_1808 and DvMF_1809 are separated by 307 nucleotides
DvMF_1807: DvMF_1807 - protein of unknown function DUF6 transmembrane (RefSeq), at 2,207,775 to 2,208,737
_1807
DvMF_1808: DvMF_1808 - protein of unknown function DUF1078 domain protein (RefSeq), at 2,208,831 to 2,210,336
_1808
DvMF_1809: DvMF_1809 - Methenyltetrahydrofolate cyclohydrolase (RefSeq), at 2,210,644 to 2,211,510
_1809
Position (kb)
2208
2209
2210
2211 Strain fitness (log2 ratio)
-1
0
1 at 2208.042 kb on + strand, within DvMF_1807 at 2208.049 kb on - strand, within DvMF_1807 at 2208.087 kb on - strand, within DvMF_1807 at 2208.435 kb on - strand, within DvMF_1807 at 2208.944 kb on - strand at 2208.962 kb on + strand at 2209.095 kb on + strand, within DvMF_1808 at 2209.203 kb on + strand, within DvMF_1808 at 2209.290 kb on - strand, within DvMF_1808 at 2209.344 kb on - strand, within DvMF_1808 at 2209.546 kb on + strand, within DvMF_1808 at 2209.694 kb on - strand, within DvMF_1808 at 2209.723 kb on + strand, within DvMF_1808 at 2209.820 kb on + strand, within DvMF_1808 at 2209.976 kb on - strand, within DvMF_1808 at 2210.021 kb on - strand, within DvMF_1808 at 2210.119 kb on + strand, within DvMF_1808 at 2210.253 kb on - strand at 2210.256 kb on + strand at 2210.350 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 2,208,042 + DvMF_1807 0.28 -0.2 2,208,049 - DvMF_1807 0.28 -0.8 2,208,087 - DvMF_1807 0.32 -0.2 2,208,435 - DvMF_1807 0.69 -0.9 2,208,944 - +1.2 2,208,962 + +1.2 2,209,095 + DvMF_1808 0.18 +1.6 2,209,203 + DvMF_1808 0.25 +1.4 2,209,290 - DvMF_1808 0.30 +1.4 2,209,344 - DvMF_1808 0.34 +1.3 2,209,546 + DvMF_1808 0.47 +1.4 2,209,694 - DvMF_1808 0.57 +1.3 2,209,723 + DvMF_1808 0.59 +1.7 2,209,820 + DvMF_1808 0.66 +1.3 2,209,976 - DvMF_1808 0.76 +1.4 2,210,021 - DvMF_1808 0.79 +1.3 2,210,119 + DvMF_1808 0.86 +1.3 2,210,253 - +1.3 2,210,256 + +1.3 2,210,350 + -0.2
Or see this region's nucleotide sequence