Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1790 and DvMF_1791 are separated by 228 nucleotides DvMF_1791 and DvMF_1792 are separated by 0 nucleotides
DvMF_1790: DvMF_1790 - CDP-diacylglycerol/serine O-phosphatidyltransferase (RefSeq), at 2,189,904 to 2,190,653
_1790
DvMF_1791: DvMF_1791 - 2-isopropylmalate synthase (RefSeq), at 2,190,882 to 2,192,426
_1791
DvMF_1792: DvMF_1792 - 3-isopropylmalate dehydratase large subunit (RefSeq), at 2,192,427 to 2,193,683
_1792
Position (kb)
2190
2191
2192
2193 Strain fitness (log2 ratio)
-7
-6
-5
-4
-3
-2
-1
0
1 at 2190.647 kb on + strand at 2190.713 kb on + strand at 2190.860 kb on - strand at 2191.060 kb on - strand, within DvMF_1791 at 2191.090 kb on + strand, within DvMF_1791 at 2191.098 kb on - strand, within DvMF_1791 at 2191.238 kb on - strand, within DvMF_1791 at 2191.420 kb on - strand, within DvMF_1791 at 2191.664 kb on - strand, within DvMF_1791 at 2191.861 kb on - strand, within DvMF_1791 at 2192.047 kb on + strand, within DvMF_1791 at 2192.079 kb on + strand, within DvMF_1791 at 2192.184 kb on + strand, within DvMF_1791 at 2192.194 kb on - strand, within DvMF_1791 at 2192.629 kb on - strand, within DvMF_1792 at 2192.659 kb on + strand, within DvMF_1792 at 2192.752 kb on + strand, within DvMF_1792 at 2192.770 kb on - strand, within DvMF_1792 at 2192.931 kb on + strand, within DvMF_1792 at 2192.941 kb on - strand, within DvMF_1792 at 2192.947 kb on + strand, within DvMF_1792 at 2193.206 kb on + strand, within DvMF_1792 at 2193.383 kb on + strand, within DvMF_1792
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 2,190,647 + -0.1 2,190,713 + -0.5 2,190,860 - -0.2 2,191,060 - DvMF_1791 0.12 -4.3 2,191,090 + DvMF_1791 0.13 -6.0 2,191,098 - DvMF_1791 0.14 -6.9 2,191,238 - DvMF_1791 0.23 -6.3 2,191,420 - DvMF_1791 0.35 -5.9 2,191,664 - DvMF_1791 0.51 -4.5 2,191,861 - DvMF_1791 0.63 -5.8 2,192,047 + DvMF_1791 0.75 -3.3 2,192,079 + DvMF_1791 0.77 -3.4 2,192,184 + DvMF_1791 0.84 -3.0 2,192,194 - DvMF_1791 0.85 -3.9 2,192,629 - DvMF_1792 0.16 -6.3 2,192,659 + DvMF_1792 0.18 -4.8 2,192,752 + DvMF_1792 0.26 -3.7 2,192,770 - DvMF_1792 0.27 -6.8 2,192,931 + DvMF_1792 0.40 -7.3 2,192,941 - DvMF_1792 0.41 -3.6 2,192,947 + DvMF_1792 0.41 -6.0 2,193,206 + DvMF_1792 0.62 -4.4 2,193,383 + DvMF_1792 0.76 -5.1
Or see this region's nucleotide sequence