Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1768 and DvMF_1769 are separated by 2 nucleotides DvMF_1769 and DvMF_1770 are separated by 72 nucleotides DvMF_1770 and DvMF_1771 are separated by 125 nucleotides
DvMF_1768: DvMF_1768 - integral membrane sensor signal transduction histidine kinase (RefSeq), at 2,164,469 to 2,166,199
_1768
DvMF_1769: DvMF_1769 - response regulator receiver protein (RefSeq), at 2,166,202 to 2,166,591
_1769
DvMF_1770: DvMF_1770 - hypothetical protein (RefSeq), at 2,166,664 to 2,167,398
_1770
DvMF_1771: DvMF_1771 - hypothetical protein (RefSeq), at 2,167,524 to 2,167,814
_1771
Position (kb)
2166
2167 Strain fitness (log2 ratio)
-1
0
1 at 2165.211 kb on + strand, within DvMF_1768 at 2165.234 kb on - strand, within DvMF_1768 at 2165.498 kb on - strand, within DvMF_1768 at 2165.664 kb on - strand, within DvMF_1768 at 2165.742 kb on - strand, within DvMF_1768 at 2166.026 kb on - strand, within DvMF_1768 at 2166.341 kb on + strand, within DvMF_1769 at 2166.815 kb on - strand, within DvMF_1770 at 2166.817 kb on + strand, within DvMF_1770 at 2166.845 kb on - strand, within DvMF_1770 at 2166.845 kb on - strand, within DvMF_1770 at 2167.061 kb on + strand, within DvMF_1770 at 2167.063 kb on - strand, within DvMF_1770
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 2,165,211 + DvMF_1768 0.43 -0.5 2,165,234 - DvMF_1768 0.44 +1.2 2,165,498 - DvMF_1768 0.59 +0.3 2,165,664 - DvMF_1768 0.69 +0.0 2,165,742 - DvMF_1768 0.74 -0.6 2,166,026 - DvMF_1768 0.90 -1.3 2,166,341 + DvMF_1769 0.36 +0.3 2,166,815 - DvMF_1770 0.21 +0.2 2,166,817 + DvMF_1770 0.21 -0.1 2,166,845 - DvMF_1770 0.25 +0.3 2,166,845 - DvMF_1770 0.25 +0.2 2,167,061 + DvMF_1770 0.54 -0.7 2,167,063 - DvMF_1770 0.54 +0.1
Or see this region's nucleotide sequence