Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1741 and DvMF_1742 are separated by 39 nucleotides DvMF_1742 and DvMF_1743 overlap by 4 nucleotides DvMF_1743 and DvMF_1744 overlap by 8 nucleotides
DvMF_1741: DvMF_1741 - tryptophan synthase subunit beta (RefSeq), at 2,128,334 to 2,129,518
_1741
DvMF_1742: DvMF_1742 - Phosphoribosylanthranilate isomerase (RefSeq), at 2,129,558 to 2,130,235
_1742
DvMF_1743: DvMF_1743 - Indole-3-glycerol-phosphate synthase (RefSeq), at 2,130,232 to 2,131,197
_1743
DvMF_1744: DvMF_1744 - anthranilate phosphoribosyltransferase (RefSeq), at 2,131,190 to 2,132,206
_1744
Position (kb)
2129
2130
2131 Strain fitness (log2 ratio)
-7
-6
-5
-4
-3
-2
-1
0
1 at 2128.583 kb on - strand, within DvMF_1741 at 2128.616 kb on - strand, within DvMF_1741 at 2128.646 kb on + strand, within DvMF_1741 at 2128.703 kb on - strand, within DvMF_1741 at 2128.726 kb on + strand, within DvMF_1741 at 2128.951 kb on - strand, within DvMF_1741 at 2128.973 kb on - strand, within DvMF_1741 at 2129.072 kb on + strand, within DvMF_1741 at 2129.092 kb on + strand, within DvMF_1741 at 2129.248 kb on + strand, within DvMF_1741 at 2129.251 kb on - strand, within DvMF_1741 at 2129.335 kb on + strand, within DvMF_1741 at 2129.368 kb on + strand, within DvMF_1741 at 2129.528 kb on - strand at 2129.646 kb on + strand, within DvMF_1742 at 2129.666 kb on + strand, within DvMF_1742 at 2129.865 kb on + strand, within DvMF_1742 at 2130.138 kb on + strand, within DvMF_1742 at 2130.178 kb on + strand at 2130.405 kb on - strand, within DvMF_1743 at 2130.452 kb on - strand, within DvMF_1743 at 2130.675 kb on + strand, within DvMF_1743 at 2130.840 kb on + strand, within DvMF_1743 at 2130.892 kb on + strand, within DvMF_1743 at 2130.909 kb on + strand, within DvMF_1743 at 2131.049 kb on + strand, within DvMF_1743
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 2,128,583 - DvMF_1741 0.21 -4.9 2,128,616 - DvMF_1741 0.24 -3.7 2,128,646 + DvMF_1741 0.26 -5.4 2,128,703 - DvMF_1741 0.31 -5.5 2,128,726 + DvMF_1741 0.33 -4.9 2,128,951 - DvMF_1741 0.52 -5.5 2,128,973 - DvMF_1741 0.54 -5.3 2,129,072 + DvMF_1741 0.62 -4.8 2,129,092 + DvMF_1741 0.64 -4.7 2,129,248 + DvMF_1741 0.77 -5.5 2,129,251 - DvMF_1741 0.77 -4.3 2,129,335 + DvMF_1741 0.84 -3.7 2,129,368 + DvMF_1741 0.87 -0.6 2,129,528 - -0.5 2,129,646 + DvMF_1742 0.13 -5.0 2,129,666 + DvMF_1742 0.16 -5.3 2,129,865 + DvMF_1742 0.45 -4.0 2,130,138 + DvMF_1742 0.86 -5.4 2,130,178 + -0.7 2,130,405 - DvMF_1743 0.18 -0.9 2,130,452 - DvMF_1743 0.23 -3.0 2,130,675 + DvMF_1743 0.46 -7.1 2,130,840 + DvMF_1743 0.63 -5.4 2,130,892 + DvMF_1743 0.68 -3.8 2,130,909 + DvMF_1743 0.70 -5.0 2,131,049 + DvMF_1743 0.85 -5.8
Or see this region's nucleotide sequence