Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1657 and DvMF_1658 overlap by 1 nucleotides DvMF_1658 and DvMF_1659 overlap by 8 nucleotides DvMF_1659 and DvMF_1660 are separated by 72 nucleotides
DvMF_1657: DvMF_1657 - phage portal protein, HK97 family (RefSeq), at 2,033,742 to 2,034,968
_1657
DvMF_1658: DvMF_1658 - Terminase (RefSeq), at 2,034,968 to 2,036,665
_1658
DvMF_1659: DvMF_1659 - putative phage terminase, small subunit, P27 family (RefSeq), at 2,036,658 to 2,037,131
_1659
DvMF_1660: DvMF_1660 - HNH endonuclease (RefSeq), at 2,037,204 to 2,037,599
_1660
Position (kb)
2034
2035
2036
2037 Strain fitness (log2 ratio)
-1
0
1
2 at 2033.977 kb on - strand, within DvMF_1657 at 2034.028 kb on + strand, within DvMF_1657 at 2034.043 kb on - strand, within DvMF_1657 at 2034.043 kb on - strand, within DvMF_1657 at 2034.049 kb on - strand, within DvMF_1657 at 2034.088 kb on + strand, within DvMF_1657 at 2034.168 kb on + strand, within DvMF_1657 at 2034.452 kb on - strand, within DvMF_1657 at 2034.480 kb on - strand, within DvMF_1657 at 2034.600 kb on + strand, within DvMF_1657 at 2034.692 kb on + strand, within DvMF_1657 at 2034.977 kb on - strand at 2035.075 kb on + strand at 2035.309 kb on + strand, within DvMF_1658 at 2035.521 kb on + strand, within DvMF_1658 at 2035.720 kb on - strand, within DvMF_1658 at 2036.413 kb on + strand, within DvMF_1658 at 2036.572 kb on - strand at 2036.635 kb on - strand at 2036.803 kb on + strand, within DvMF_1659 at 2036.821 kb on + strand, within DvMF_1659 at 2036.821 kb on + strand, within DvMF_1659 at 2036.976 kb on - strand, within DvMF_1659 at 2036.976 kb on - strand, within DvMF_1659 at 2037.100 kb on - strand at 2037.201 kb on + strand at 2037.254 kb on - strand, within DvMF_1660 at 2037.285 kb on - strand, within DvMF_1660 at 2037.526 kb on - strand, within DvMF_1660 at 2037.600 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 2,033,977 - DvMF_1657 0.19 +0.9 2,034,028 + DvMF_1657 0.23 -0.6 2,034,043 - DvMF_1657 0.25 -0.6 2,034,043 - DvMF_1657 0.25 -0.1 2,034,049 - DvMF_1657 0.25 -0.3 2,034,088 + DvMF_1657 0.28 +0.0 2,034,168 + DvMF_1657 0.35 -0.3 2,034,452 - DvMF_1657 0.58 -0.4 2,034,480 - DvMF_1657 0.60 -1.2 2,034,600 + DvMF_1657 0.70 -0.8 2,034,692 + DvMF_1657 0.77 -0.3 2,034,977 - -0.3 2,035,075 + -0.0 2,035,309 + DvMF_1658 0.20 +1.0 2,035,521 + DvMF_1658 0.33 -0.3 2,035,720 - DvMF_1658 0.44 -0.5 2,036,413 + DvMF_1658 0.85 +1.6 2,036,572 - -0.1 2,036,635 - -0.3 2,036,803 + DvMF_1659 0.31 -0.1 2,036,821 + DvMF_1659 0.34 +0.3 2,036,821 + DvMF_1659 0.34 -0.9 2,036,976 - DvMF_1659 0.67 -0.2 2,036,976 - DvMF_1659 0.67 +0.1 2,037,100 - +1.8 2,037,201 + -0.4 2,037,254 - DvMF_1660 0.13 -0.1 2,037,285 - DvMF_1660 0.20 -0.6 2,037,526 - DvMF_1660 0.81 -0.9 2,037,600 - -0.6
Or see this region's nucleotide sequence