Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1608 and DvMF_1609 are separated by 112 nucleotides DvMF_1609 and DvMF_1610 are separated by 83 nucleotides DvMF_1610 and DvMF_1611 are separated by 4 nucleotides
DvMF_1608: DvMF_1608 - histidine kinase (RefSeq), at 1,980,187 to 1,981,884
_1608
DvMF_1609: DvMF_1609 - cytoplasmic chaperone TorD family protein (RefSeq), at 1,981,997 to 1,982,851
_1609
DvMF_1610: DvMF_1610 - anaerobic dimethyl sulfoxide reductase subunit C (RefSeq), at 1,982,935 to 1,983,810
_1610
DvMF_1611: DvMF_1611 - dimethylsulfoxide reductase, chain B (RefSeq), at 1,983,815 to 1,984,432
_1611
Position (kb)
1981
1982
1983 Strain fitness (log2 ratio)
-1
0
1 at 1981.442 kb on + strand, within DvMF_1608 at 1981.487 kb on + strand, within DvMF_1608 at 1981.540 kb on + strand, within DvMF_1608 at 1981.649 kb on + strand, within DvMF_1608 at 1981.688 kb on + strand, within DvMF_1608 at 1981.838 kb on + strand at 1981.962 kb on + strand at 1982.168 kb on + strand, within DvMF_1609 at 1982.277 kb on - strand, within DvMF_1609 at 1982.750 kb on + strand, within DvMF_1609 at 1982.866 kb on - strand at 1982.916 kb on + strand at 1982.958 kb on + strand at 1983.020 kb on + strand at 1983.168 kb on + strand, within DvMF_1610 at 1983.246 kb on - strand, within DvMF_1610 at 1983.253 kb on - strand, within DvMF_1610 at 1983.377 kb on + strand, within DvMF_1610 at 1983.470 kb on + strand, within DvMF_1610 at 1983.588 kb on - strand, within DvMF_1610
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 1,981,442 + DvMF_1608 0.74 -0.6 1,981,487 + DvMF_1608 0.77 -0.3 1,981,540 + DvMF_1608 0.80 -0.2 1,981,649 + DvMF_1608 0.86 -0.1 1,981,688 + DvMF_1608 0.88 -0.3 1,981,838 + +0.5 1,981,962 + -0.3 1,982,168 + DvMF_1609 0.20 -0.3 1,982,277 - DvMF_1609 0.33 -1.4 1,982,750 + DvMF_1609 0.88 -0.7 1,982,866 - -0.1 1,982,916 + -0.2 1,982,958 + +0.1 1,983,020 + -0.2 1,983,168 + DvMF_1610 0.27 -0.3 1,983,246 - DvMF_1610 0.36 -0.3 1,983,253 - DvMF_1610 0.36 -0.1 1,983,377 + DvMF_1610 0.50 -0.2 1,983,470 + DvMF_1610 0.61 -0.7 1,983,588 - DvMF_1610 0.75 -0.3
Or see this region's nucleotide sequence