Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1571 and DvMF_1572 are separated by 302 nucleotides DvMF_1572 and DvMF_1573 are separated by 169 nucleotides
DvMF_1571: DvMF_1571 - extracellular solute-binding protein family 3 (RefSeq), at 1,937,297 to 1,938,046
_1571
DvMF_1572: DvMF_1572 - flavin reductase domain protein FMN-binding (RefSeq), at 1,938,349 to 1,938,921
_1572
DvMF_1573: DvMF_1573 - Undecaprenyl-phosphate galactose phosphotransferase, WbaP (RefSeq), at 1,939,091 to 1,940,503
_1573
Position (kb)
1938
1939 Strain fitness (log2 ratio)
-1
0
1
2 at 1937.364 kb on - strand at 1937.457 kb on + strand, within DvMF_1571 at 1937.494 kb on + strand, within DvMF_1571 at 1937.569 kb on + strand, within DvMF_1571 at 1937.584 kb on - strand, within DvMF_1571 at 1937.633 kb on - strand, within DvMF_1571 at 1937.673 kb on + strand, within DvMF_1571 at 1937.682 kb on + strand, within DvMF_1571 at 1937.918 kb on - strand, within DvMF_1571 at 1938.250 kb on - strand at 1938.263 kb on - strand at 1938.530 kb on - strand, within DvMF_1572 at 1938.646 kb on - strand, within DvMF_1572 at 1938.917 kb on + strand at 1939.047 kb on + strand at 1939.143 kb on - strand at 1939.278 kb on - strand, within DvMF_1573 at 1939.709 kb on + strand, within DvMF_1573 at 1939.717 kb on - strand, within DvMF_1573 at 1939.774 kb on + strand, within DvMF_1573
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 1,937,364 - -0.5 1,937,457 + DvMF_1571 0.21 -0.3 1,937,494 + DvMF_1571 0.26 -0.4 1,937,569 + DvMF_1571 0.36 -0.1 1,937,584 - DvMF_1571 0.38 -0.4 1,937,633 - DvMF_1571 0.45 -1.1 1,937,673 + DvMF_1571 0.50 -0.6 1,937,682 + DvMF_1571 0.51 -0.5 1,937,918 - DvMF_1571 0.83 -0.2 1,938,250 - -0.6 1,938,263 - -0.2 1,938,530 - DvMF_1572 0.32 +2.0 1,938,646 - DvMF_1572 0.52 -0.6 1,938,917 + -0.5 1,939,047 + -0.2 1,939,143 - -0.3 1,939,278 - DvMF_1573 0.13 +1.2 1,939,709 + DvMF_1573 0.44 -0.1 1,939,717 - DvMF_1573 0.44 -0.0 1,939,774 + DvMF_1573 0.48 +0.2
Or see this region's nucleotide sequence