Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1533 and DvMF_1534 overlap by 17 nucleotides DvMF_1534 and DvMF_1535 are separated by 330 nucleotides DvMF_1535 and DvMF_1536 are separated by 395 nucleotides
DvMF_1533: DvMF_1533 - hypothetical protein (RefSeq), at 1,890,393 to 1,891,082
_1533
DvMF_1534: DvMF_1534 - hypothetical protein (RefSeq), at 1,891,066 to 1,891,599
_1534
DvMF_1535: DvMF_1535 - Saccharopine dehydrogenase (RefSeq), at 1,891,930 to 1,893,120
_1535
DvMF_1536: DvMF_1536 - arginine decarboxylase (RefSeq), at 1,893,516 to 1,895,453
_1536
Position (kb)
1891
1892
1893
1894 Strain fitness (log2 ratio)
-1
0
1 at 1891.063 kb on + strand at 1891.691 kb on + strand at 1891.771 kb on - strand at 1891.927 kb on - strand at 1892.153 kb on + strand, within DvMF_1535 at 1892.161 kb on - strand, within DvMF_1535 at 1892.308 kb on + strand, within DvMF_1535 at 1892.392 kb on + strand, within DvMF_1535 at 1892.528 kb on - strand, within DvMF_1535 at 1892.528 kb on - strand, within DvMF_1535 at 1892.858 kb on + strand, within DvMF_1535 at 1893.213 kb on + strand at 1893.229 kb on - strand at 1893.304 kb on - strand at 1893.424 kb on + strand at 1893.594 kb on - strand at 1893.825 kb on + strand, within DvMF_1536 at 1893.857 kb on + strand, within DvMF_1536 at 1893.857 kb on + strand, within DvMF_1536 at 1893.865 kb on - strand, within DvMF_1536 at 1893.865 kb on - strand, within DvMF_1536
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 1,891,063 + -0.6 1,891,691 + -0.2 1,891,771 - +0.0 1,891,927 - -0.3 1,892,153 + DvMF_1535 0.19 -0.6 1,892,161 - DvMF_1535 0.19 -0.7 1,892,308 + DvMF_1535 0.32 -0.6 1,892,392 + DvMF_1535 0.39 -1.1 1,892,528 - DvMF_1535 0.50 -0.9 1,892,528 - DvMF_1535 0.50 -1.0 1,892,858 + DvMF_1535 0.78 -0.8 1,893,213 + -0.2 1,893,229 - -0.3 1,893,304 - -0.6 1,893,424 + -0.3 1,893,594 - +0.1 1,893,825 + DvMF_1536 0.16 -0.6 1,893,857 + DvMF_1536 0.18 -0.5 1,893,857 + DvMF_1536 0.18 -1.0 1,893,865 - DvMF_1536 0.18 -1.0 1,893,865 - DvMF_1536 0.18 -0.8
Or see this region's nucleotide sequence