Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1519 and DvMF_1520 are separated by 15 nucleotides DvMF_1520 and DvMF_1521 are separated by 125 nucleotides DvMF_1521 and DvMF_1522 are separated by 12 nucleotides
DvMF_1519: DvMF_1519 - respiratory-chain NADH dehydrogenase subunit 1 (RefSeq), at 1,875,462 to 1,876,310
_1519
DvMF_1520: DvMF_1520 - NADH ubiquinone oxidoreductase 20 kDa subunit (RefSeq), at 1,876,326 to 1,876,799
_1520
DvMF_1521: DvMF_1521 - hypothetical protein (RefSeq), at 1,876,925 to 1,877,317
_1521
DvMF_1522: DvMF_1522 - NADH-ubiquinone oxidoreductase chain 49kDa (RefSeq), at 1,877,330 to 1,878,406
_1522
Position (kb) 1876
1877
1878 Strain fitness (log2 ratio) -1
0
1 at 1876.125 kb on - strand, within DvMF_1519 at 1876.221 kb on + strand, within DvMF_1519 at 1876.320 kb on - strand at 1876.946 kb on - strand at 1876.946 kb on - strand at 1876.957 kb on + strand at 1876.987 kb on + strand, within DvMF_1521 at 1877.116 kb on + strand, within DvMF_1521 at 1877.666 kb on - strand, within DvMF_1522 at 1877.970 kb on + strand, within DvMF_1522 at 1878.079 kb on + strand, within DvMF_1522 at 1878.184 kb on - strand, within DvMF_1522
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 1,876,125 - DvMF_1519 0.78 +0.1 1,876,221 + DvMF_1519 0.89 +0.3 1,876,320 - -0.5 1,876,946 - +0.1 1,876,946 - +0.2 1,876,957 + +0.3 1,876,987 + DvMF_1521 0.16 +0.6 1,877,116 + DvMF_1521 0.49 +0.3 1,877,666 - DvMF_1522 0.31 -0.0 1,877,970 + DvMF_1522 0.59 +0.1 1,878,079 + DvMF_1522 0.70 +0.2 1,878,184 - DvMF_1522 0.79 -0.0
Or see this region's nucleotide sequence