Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1493 and DvMF_1494 are separated by 736 nucleotides DvMF_1494 and DvMF_1495 are separated by 618 nucleotides
DvMF_1493: DvMF_1493 - two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq), at 1,833,593 to 1,835,533
_1493
DvMF_1494: DvMF_1494 - type I secretion outer membrane protein, TolC family (RefSeq), at 1,836,270 to 1,837,622
_1494
DvMF_1495: DvMF_1495 - von Willebrand factor type A (RefSeq), at 1,838,241 to 1,845,677
_1495
Position (kb)
1836
1837
1838 Strain fitness (log2 ratio)
-1
0
1 at 1835.333 kb on + strand, within DvMF_1493 at 1835.352 kb on - strand at 1836.257 kb on + strand at 1836.327 kb on + strand at 1836.416 kb on + strand, within DvMF_1494 at 1836.490 kb on + strand, within DvMF_1494 at 1836.498 kb on - strand, within DvMF_1494 at 1836.498 kb on - strand, within DvMF_1494 at 1836.498 kb on - strand, within DvMF_1494 at 1836.532 kb on - strand, within DvMF_1494 at 1836.700 kb on + strand, within DvMF_1494 at 1836.728 kb on + strand, within DvMF_1494 at 1836.986 kb on + strand, within DvMF_1494 at 1836.996 kb on + strand, within DvMF_1494 at 1837.211 kb on - strand, within DvMF_1494 at 1837.397 kb on - strand, within DvMF_1494 at 1837.732 kb on + strand at 1837.818 kb on + strand at 1837.902 kb on - strand at 1837.921 kb on + strand at 1837.929 kb on - strand at 1837.950 kb on + strand at 1838.074 kb on - strand at 1838.122 kb on + strand at 1838.207 kb on + strand at 1838.314 kb on - strand at 1838.349 kb on - strand at 1838.364 kb on - strand at 1838.414 kb on + strand at 1838.575 kb on - strand at 1838.599 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 1,835,333 + DvMF_1493 0.90 -0.2 1,835,352 - -0.0 1,836,257 + -0.6 1,836,327 + +0.7 1,836,416 + DvMF_1494 0.11 +0.6 1,836,490 + DvMF_1494 0.16 +0.6 1,836,498 - DvMF_1494 0.17 +0.8 1,836,498 - DvMF_1494 0.17 +0.9 1,836,498 - DvMF_1494 0.17 +0.6 1,836,532 - DvMF_1494 0.19 +1.1 1,836,700 + DvMF_1494 0.32 +0.4 1,836,728 + DvMF_1494 0.34 +0.4 1,836,986 + DvMF_1494 0.53 +0.6 1,836,996 + DvMF_1494 0.54 +0.8 1,837,211 - DvMF_1494 0.70 +0.6 1,837,397 - DvMF_1494 0.83 +0.6 1,837,732 + -0.0 1,837,818 + -0.6 1,837,902 - -0.4 1,837,921 + -0.4 1,837,929 - -0.5 1,837,950 + -0.7 1,838,074 - -0.3 1,838,122 + -0.3 1,838,207 + -0.4 1,838,314 - -1.4 1,838,349 - +0.1 1,838,364 - +0.3 1,838,414 + +0.5 1,838,575 - -0.1 1,838,599 - +0.4
Or see this region's nucleotide sequence