Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1462 and DvMF_1463 are separated by 371 nucleotides DvMF_1463 and DvMF_1464 are separated by 165 nucleotides
DvMF_1462: DvMF_1462 - phosphoglycerate mutase 1 family (RefSeq), at 1,792,258 to 1,793,007
_1462
DvMF_1463: DvMF_1463 - response regulator receiver protein (RefSeq), at 1,793,379 to 1,794,743
_1463
DvMF_1464: DvMF_1464 - Homocysteine formation from aspartate semialdehyde (DUF39 component) (from data) , at 1,794,909 to 1,796,081
_1464
Position (kb)
1793
1794
1795 Strain fitness (log2 ratio)
-6
-5
-4
-3
-2
-1
0
1 at 1792.442 kb on + strand, within DvMF_1462 at 1792.745 kb on + strand, within DvMF_1462 at 1792.901 kb on - strand, within DvMF_1462 at 1792.901 kb on - strand, within DvMF_1462 at 1792.901 kb on - strand, within DvMF_1462 at 1792.968 kb on + strand at 1792.976 kb on - strand at 1793.022 kb on + strand at 1793.285 kb on - strand at 1794.260 kb on - strand, within DvMF_1463 at 1795.105 kb on - strand, within DvMF_1464 at 1795.246 kb on - strand, within DvMF_1464 at 1795.251 kb on - strand, within DvMF_1464 at 1795.388 kb on - strand, within DvMF_1464 at 1795.393 kb on - strand, within DvMF_1464 at 1795.553 kb on + strand, within DvMF_1464 at 1795.553 kb on + strand, within DvMF_1464 at 1795.602 kb on + strand, within DvMF_1464 at 1795.609 kb on + strand, within DvMF_1464 at 1795.610 kb on - strand, within DvMF_1464 at 1795.692 kb on - strand, within DvMF_1464 at 1795.699 kb on - strand, within DvMF_1464
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 1,792,442 + DvMF_1462 0.25 -0.6 1,792,745 + DvMF_1462 0.65 -0.0 1,792,901 - DvMF_1462 0.86 -0.4 1,792,901 - DvMF_1462 0.86 +0.1 1,792,901 - DvMF_1462 0.86 -0.5 1,792,968 + -0.6 1,792,976 - -0.3 1,793,022 + -0.1 1,793,285 - -0.6 1,794,260 - DvMF_1463 0.65 +0.8 1,795,105 - DvMF_1464 0.17 -5.0 1,795,246 - DvMF_1464 0.29 -4.0 1,795,251 - DvMF_1464 0.29 -4.5 1,795,388 - DvMF_1464 0.41 -4.6 1,795,393 - DvMF_1464 0.41 -4.6 1,795,553 + DvMF_1464 0.55 -3.5 1,795,553 + DvMF_1464 0.55 -6.1 1,795,602 + DvMF_1464 0.59 -4.9 1,795,609 + DvMF_1464 0.60 -3.3 1,795,610 - DvMF_1464 0.60 -3.4 1,795,692 - DvMF_1464 0.67 -2.6 1,795,699 - DvMF_1464 0.67 -4.6
Or see this region's nucleotide sequence