Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1397 and DvMF_1398 are separated by 264 nucleotides DvMF_1398 and DvMF_1399 are separated by 487 nucleotides
DvMF_1397: DvMF_1397 - hypothetical protein (RefSeq), at 1,704,097 to 1,704,564
_1397
DvMF_1398: DvMF_1398 - ATP-dependent reduction of co(II)balamin (RamA-like) (from data) , at 1,704,829 to 1,706,886
_1398
DvMF_1399: DvMF_1399 - Ribosomal small subunit Rsm22 (RefSeq), at 1,707,374 to 1,710,295
_1399
Position (kb)
1704
1705
1706
1707 Strain fitness (log2 ratio)
-2
-1
0
1 at 1703.847 kb on - strand at 1703.930 kb on + strand at 1704.111 kb on + strand at 1704.119 kb on - strand at 1704.360 kb on + strand, within DvMF_1397 at 1704.368 kb on + strand, within DvMF_1397 at 1704.400 kb on - strand, within DvMF_1397 at 1704.400 kb on - strand, within DvMF_1397 at 1704.574 kb on + strand at 1704.939 kb on + strand at 1704.956 kb on - strand at 1705.066 kb on + strand, within DvMF_1398 at 1705.431 kb on + strand, within DvMF_1398 at 1705.578 kb on - strand, within DvMF_1398 at 1705.580 kb on + strand, within DvMF_1398 at 1705.857 kb on - strand, within DvMF_1398 at 1706.209 kb on + strand, within DvMF_1398 at 1706.256 kb on + strand, within DvMF_1398 at 1706.380 kb on - strand, within DvMF_1398 at 1706.801 kb on - strand at 1706.986 kb on + strand at 1707.392 kb on + strand at 1707.447 kb on + strand at 1707.457 kb on + strand at 1707.596 kb on + strand at 1707.740 kb on - strand, within DvMF_1399
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 1,703,847 - -0.2 1,703,930 + -0.3 1,704,111 + -0.2 1,704,119 - -0.5 1,704,360 + DvMF_1397 0.56 -0.8 1,704,368 + DvMF_1397 0.58 -0.4 1,704,400 - DvMF_1397 0.65 -0.3 1,704,400 - DvMF_1397 0.65 -0.2 1,704,574 + -1.9 1,704,939 + -0.6 1,704,956 - -2.1 1,705,066 + DvMF_1398 0.12 -0.2 1,705,431 + DvMF_1398 0.29 -1.5 1,705,578 - DvMF_1398 0.36 -1.4 1,705,580 + DvMF_1398 0.36 -1.7 1,705,857 - DvMF_1398 0.50 -1.4 1,706,209 + DvMF_1398 0.67 -2.2 1,706,256 + DvMF_1398 0.69 -1.4 1,706,380 - DvMF_1398 0.75 -1.1 1,706,801 - -1.8 1,706,986 + -0.6 1,707,392 + -0.3 1,707,447 + -0.2 1,707,457 + +0.0 1,707,596 + -0.0 1,707,740 - DvMF_1399 0.13 -0.2
Or see this region's nucleotide sequence