Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1374 and DvMF_1375 overlap by 32 nucleotides DvMF_1375 and DvMF_1376 are separated by 359 nucleotides
DvMF_1374: DvMF_1374 - putative PAS/PAC sensor protein (RefSeq), at 1,682,438 to 1,683,664
_1374
DvMF_1375: DvMF_1375 - histidine kinase (RefSeq), at 1,683,633 to 1,684,976
_1375
DvMF_1376: DvMF_1376 - phosphomethylpyrimidine kinase (RefSeq), at 1,685,336 to 1,686,184
_1376
Position (kb)
1683
1684
1685 Strain fitness (log2 ratio)
-1
0
1 at 1682.795 kb on - strand, within DvMF_1374 at 1682.838 kb on + strand, within DvMF_1374 at 1682.957 kb on + strand, within DvMF_1374 at 1682.965 kb on - strand, within DvMF_1374 at 1682.993 kb on - strand, within DvMF_1374 at 1683.059 kb on + strand, within DvMF_1374 at 1683.139 kb on + strand, within DvMF_1374 at 1683.147 kb on - strand, within DvMF_1374 at 1683.471 kb on + strand, within DvMF_1374 at 1683.545 kb on + strand at 1683.845 kb on - strand, within DvMF_1375 at 1683.950 kb on - strand, within DvMF_1375 at 1683.957 kb on + strand, within DvMF_1375 at 1684.064 kb on - strand, within DvMF_1375 at 1684.102 kb on - strand, within DvMF_1375 at 1684.194 kb on - strand, within DvMF_1375 at 1684.231 kb on + strand, within DvMF_1375 at 1684.239 kb on - strand, within DvMF_1375 at 1684.267 kb on - strand, within DvMF_1375 at 1684.391 kb on + strand, within DvMF_1375 at 1684.576 kb on - strand, within DvMF_1375 at 1684.605 kb on - strand, within DvMF_1375 at 1684.630 kb on - strand, within DvMF_1375 at 1684.765 kb on - strand, within DvMF_1375 at 1684.802 kb on + strand, within DvMF_1375 at 1685.111 kb on + strand at 1685.167 kb on - strand at 1685.359 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 1,682,795 - DvMF_1374 0.29 -0.7 1,682,838 + DvMF_1374 0.33 -0.4 1,682,957 + DvMF_1374 0.42 +0.2 1,682,965 - DvMF_1374 0.43 -0.7 1,682,993 - DvMF_1374 0.45 -0.3 1,683,059 + DvMF_1374 0.51 -0.4 1,683,139 + DvMF_1374 0.57 -0.1 1,683,147 - DvMF_1374 0.58 -0.6 1,683,471 + DvMF_1374 0.84 -0.4 1,683,545 + -0.8 1,683,845 - DvMF_1375 0.16 +0.2 1,683,950 - DvMF_1375 0.24 -0.0 1,683,957 + DvMF_1375 0.24 -0.3 1,684,064 - DvMF_1375 0.32 -0.1 1,684,102 - DvMF_1375 0.35 -0.0 1,684,194 - DvMF_1375 0.42 +0.1 1,684,231 + DvMF_1375 0.44 +0.1 1,684,239 - DvMF_1375 0.45 +0.1 1,684,267 - DvMF_1375 0.47 +0.2 1,684,391 + DvMF_1375 0.56 +0.4 1,684,576 - DvMF_1375 0.70 +1.1 1,684,605 - DvMF_1375 0.72 +0.0 1,684,630 - DvMF_1375 0.74 -0.3 1,684,765 - DvMF_1375 0.84 +0.3 1,684,802 + DvMF_1375 0.87 -0.2 1,685,111 + +0.1 1,685,167 - -0.8 1,685,359 - -0.1
Or see this region's nucleotide sequence