Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1309 and DvMF_R0037 are separated by 269 nucleotides DvMF_R0037 and DvMF_1310 are separated by 618 nucleotides DvMF_1310 and DvMF_1311 are separated by 45 nucleotides
DvMF_1309: DvMF_1309 - hypothetical protein (RefSeq), at 1,597,531 to 1,598,331
_1309
DvMF_R0037: DvMF_R0037 - tRNA-Arg (RefSeq), at 1,598,601 to 1,598,677
_R0037
DvMF_1310: DvMF_1310 - FolC bifunctional protein (RefSeq), at 1,599,296 to 1,600,795
_1310
DvMF_1311: DvMF_1311 - selenocysteine synthase (RefSeq), at 1,600,841 to 1,602,361
_1311
Position (kb)
1599
1600
1601 Strain fitness (log2 ratio)
-2
-1
0
1 at 1598.405 kb on - strand at 1598.407 kb on + strand at 1598.410 kb on - strand at 1598.456 kb on + strand at 1598.734 kb on + strand at 1598.762 kb on - strand at 1598.768 kb on - strand at 1598.907 kb on - strand at 1598.918 kb on + strand at 1598.918 kb on + strand at 1598.926 kb on - strand at 1598.940 kb on + strand at 1598.953 kb on - strand at 1599.162 kb on - strand at 1600.210 kb on - strand, within DvMF_1310 at 1600.867 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 1,598,405 - -1.1 1,598,407 + -0.2 1,598,410 - -0.1 1,598,456 + -0.5 1,598,734 + -0.2 1,598,762 - -0.4 1,598,768 - -0.3 1,598,907 - -0.1 1,598,918 + -0.5 1,598,918 + -0.7 1,598,926 - -0.3 1,598,940 + -0.4 1,598,953 - +0.7 1,599,162 - +0.2 1,600,210 - DvMF_1310 0.61 -2.0 1,600,867 - -0.8
Or see this region's nucleotide sequence