Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1158 and DvMF_1159 overlap by 1 nucleotides DvMF_1159 and DvMF_1160 are separated by 165 nucleotides
DvMF_1158: DvMF_1158 - transglutaminase family protein cysteine peptidase BTLCP (RefSeq), at 1,422,747 to 1,424,039
_1158
DvMF_1159: DvMF_1159 - type I secretion membrane fusion protein, HlyD family (RefSeq), at 1,424,039 to 1,425,439
_1159
DvMF_1160: DvMF_1160 - cyclic nucleotide-binding protein (RefSeq), at 1,425,605 to 1,427,809
_1160
Position (kb)
1424
1425
1426 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1423.188 kb on + strand, within DvMF_1158 at 1423.355 kb on - strand, within DvMF_1158 at 1423.601 kb on + strand, within DvMF_1158 at 1424.093 kb on + strand at 1424.233 kb on + strand, within DvMF_1159 at 1424.294 kb on + strand, within DvMF_1159 at 1424.306 kb on + strand, within DvMF_1159 at 1424.488 kb on + strand, within DvMF_1159 at 1424.488 kb on + strand, within DvMF_1159 at 1424.496 kb on - strand, within DvMF_1159 at 1424.701 kb on + strand, within DvMF_1159 at 1424.709 kb on - strand, within DvMF_1159 at 1424.709 kb on - strand, within DvMF_1159 at 1424.709 kb on - strand, within DvMF_1159 at 1424.768 kb on - strand, within DvMF_1159 at 1425.101 kb on + strand, within DvMF_1159 at 1425.166 kb on - strand, within DvMF_1159 at 1425.310 kb on - strand at 1425.401 kb on - strand at 1425.662 kb on - strand at 1425.937 kb on - strand, within DvMF_1160 at 1425.942 kb on + strand, within DvMF_1160 at 1425.989 kb on - strand, within DvMF_1160 at 1426.071 kb on + strand, within DvMF_1160 at 1426.172 kb on - strand, within DvMF_1160 at 1426.257 kb on - strand, within DvMF_1160
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 1,423,188 + DvMF_1158 0.34 -1.4 1,423,355 - DvMF_1158 0.47 -2.9 1,423,601 + DvMF_1158 0.66 -1.4 1,424,093 + +0.6 1,424,233 + DvMF_1159 0.14 +0.8 1,424,294 + DvMF_1159 0.18 +1.0 1,424,306 + DvMF_1159 0.19 +0.9 1,424,488 + DvMF_1159 0.32 +0.9 1,424,488 + DvMF_1159 0.32 +0.8 1,424,496 - DvMF_1159 0.33 +0.9 1,424,701 + DvMF_1159 0.47 +1.0 1,424,709 - DvMF_1159 0.48 +1.0 1,424,709 - DvMF_1159 0.48 +0.9 1,424,709 - DvMF_1159 0.48 +1.1 1,424,768 - DvMF_1159 0.52 +0.9 1,425,101 + DvMF_1159 0.76 +0.8 1,425,166 - DvMF_1159 0.80 +0.8 1,425,310 - +0.9 1,425,401 - +0.3 1,425,662 - -0.5 1,425,937 - DvMF_1160 0.15 +0.9 1,425,942 + DvMF_1160 0.15 +1.2 1,425,989 - DvMF_1160 0.17 +1.0 1,426,071 + DvMF_1160 0.21 +0.9 1,426,172 - DvMF_1160 0.26 +0.6 1,426,257 - DvMF_1160 0.30 +1.0
Or see this region's nucleotide sequence